Gene MADE_00690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00690 
Symbol 
ID6776938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp719872 
End bp720423 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID642754126 
Producttranscription termination/antitermination factor NusG 
Protein accessionYP_002125002 
Protein GI196155513 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000164845 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAG AAGAAGCAGT AAAGAAAAGA TGGTACGTAG TTCAAGCCTA TTCGCAATAC 
GAAGCTCGCG TTAAAAAGAC GTTGCTTGAA TACATTAAAA TGCACAACAT GGAAGACTAC 
TTCGGTCAGG TACTAGTACC AACAGAGGAA GTTGTTGAAA TGCGTGCAGG TCAAAAGCGT 
AAATCTGAGC GTAAGTTCTA CCCGGGTTAT GTATTGGTAG AAATGGCGAT GACCGAAGAG 
TCATGGCACT TAGTGAAAAG CGTACCTCGC GTACTAGGTT TCATCGGCGG CACCTCTGAC 
CGTCCTATGC CAATTACGCA GAAAGAAGCA GACGCTATCC TAAATCGTCT TGAAGAAAAC 
GTTGATAAGC CAAGACCGAA AACATTGTTC GAGCCAGGCG AAGTGGTTCG CGTTACCGAT 
GGTCCATTTG CCGACTTCAA TGGTGTGGTA GAAGAAGTAG ACTACGAAAA GAGCCGCGTA 
AAAGTATCGG TACTTATCTT CGGTCGTTCT ACACCAGTAG ACCTAGAATT TGGTCAGGTA 
GAAAAAGGCT AA
 
Protein sequence
MSEEEAVKKR WYVVQAYSQY EARVKKTLLE YIKMHNMEDY FGQVLVPTEE VVEMRAGQKR 
KSERKFYPGY VLVEMAMTEE SWHLVKSVPR VLGFIGGTSD RPMPITQKEA DAILNRLEEN 
VDKPRPKTLF EPGEVVRVTD GPFADFNGVV EEVDYEKSRV KVSVLIFGRS TPVDLEFGQV 
EKG