| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00581 |
|---|
| Symbol | |
|---|
| ID | 6776929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 616482 |
|---|
| End bp | 617351 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642754016 |
|---|
| Product | Thioredoxin domain-containing protein |
|---|
| Protein accession | YP_002124893 |
|---|
| Protein GI | 196155404 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC TCGTTGCAAA TAGCCAAGCA ACTATTGTTG ATATTACGGT AGAAAACTTT
CAGCAAATCA TAGTAGAGGC TTCTCAAGAG AAGCTGGTAC TCATTGATTT TTGGGCTGAC
TGGTGTGAGT CGTGCAAAGA TTTAATGCCT ATTTTGGAAA AACTGGCCGG TGAATACAGC
CAGCATCTAA TATTGGCGAA AGTTGACTGT GAAGCGCAGC AAGAAGTAGC GGCGCAATTT
GGTATCAGAA GCTTGCCTAC AGTGATGGTA GTACAAAATG GTCAGCCAGT AGATGGCTTT
GCTGGAGTGC AGCCTGAGCA GCAAATTCGA GAGATGCTAA CAAAGTATCT GCCTAACCCT
GAAGACGAGC TTCTCGCTAC AGCAGGGAAA GCTATTCAGC AGGGAGAGTA CGCCGAAGCA
TTGCCAGCAG CGAAAGAGGC ACTTTCTCTT AATCCTGACA ATGTAAACGC CAAGTACATG
CTTATTGACT GCTACATTGA AACGGGGTCA ATTGATACAG CAAAAGCACT GCTTGAGGAT
ATTAAACTTG TTGACCAGGA TTCACGGTAT AAAAGCTTAG CGGGTAAAAT TGAACTTGCA
GAGCAAGCGG CAGATACGCC TGAAATTAGA CAGCTTCAAG CTGCTGTTGA AGCAAACCCT
GACGATCTTC AGCTTAAAAT TGATTTAGCG ATACAGCTAC AGCAAGCGAA TAAAGCACAA
GACGCGCTAG CGCTGCTTTA TAGCGTATTA AAAACAGAGT TAGGGTTTGG TGACGCTAGA
AAGCTAATGA TGGATATGAT GAATGCGTTA GCAGATGGTG ATCCGCTTAA ATCCGAGTAT
CGCCGAAAAG TATATAGCCT GCTTTACTAA
|
|---|
| Protein sequence | MENLVANSQA TIVDITVENF QQIIVEASQE KLVLIDFWAD WCESCKDLMP ILEKLAGEYS
QHLILAKVDC EAQQEVAAQF GIRSLPTVMV VQNGQPVDGF AGVQPEQQIR EMLTKYLPNP
EDELLATAGK AIQQGEYAEA LPAAKEALSL NPDNVNAKYM LIDCYIETGS IDTAKALLED
IKLVDQDSRY KSLAGKIELA EQAADTPEIR QLQAAVEANP DDLQLKIDLA IQLQQANKAQ
DALALLYSVL KTELGFGDAR KLMMDMMNAL ADGDPLKSEY RRKVYSLLY
|
|---|
| |