| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00570 |
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| Symbol | rho |
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| ID | 6777215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 602058 |
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| End bp | 603323 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754004 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_002124882 |
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| Protein GI | 196155393 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.576624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA CTGAATTAAA GAACAAACCA ATTAGCGAGT TGGTTAACCT GGCCGAGGAA
ATGGGCCTGG AAAACATGGC ACGCGCCAGA AAACAAGACA TCATTTTCTC GATCCTTAAG
ACGCACGCAA AAAGCGGTGA AGATATCTTT GGGGATGGGG TATTAGAAAT TTTACAGGAC
GGTTTCGGCT TTTTACGCTC AGCTGATTCA TCGTATCTAG CAGGCCCTGA CGATATTTAC
GTATCGCCAA GCCAAATCCG ACGCTTTAAC CTGCGCACCG GTGATACGAT TGCTGGAAAG
ATTCGTCCAC CGAAAGACAG CGAACGTTAT TTTGCGCTTC TAAAAATCCG CGAAGTTAAC
TTCGACAAGC CTGAAAACTC ACGTAACAAA ATCCTCTTTG AAAACCTTAC ACCGCTACAC
GCAGCAGATC GCTTGCGCAT GGAGCGTGGT AACGGTTCGA CCGAAGACAT TACAGCACGT
GTACTAGATT TGGCGTCACC TATCGGTAAA GGCCAACGTG GTCTTATCGT AGCGCCACCT
AAAGCCGGTA AAACACTGCT TCTTCAAAAT ATTGCTCAGT CAATTGCTGC TAACCACCCC
GATTGTGAGT TAATGGTATT GCTTATCGAC GAGCGCCCGG AAGAAGTAAC GGAGATGCAC
CGCCTTGTTC AAGGTGAAGT GGTTGCATCA ACCTTCGATG AGCCAGCTAG CCGTCACGTA
CAAGTGGCAG AAATGGTTAT CGAAAAAGCC AAACGTCTTG TTGAACACAA AAAAGACGTG
GTTATTTTGC TCGACTCAAT CACCCGTCTT GCGCGCGCAT ACAACACGGT TATTCCTTCA
TCGGGTAAAG TACTTACTGG TGGTGTTGAC GCTAACGCGC TTCATAAACC AAAGCGTTTC
TTCGGTGCTG CCCGTAACGT AGAAGAGGGC GGAAGTTTAA CGATTATCGC CACTGCGCTT
ATCGATACCG GCTCTAAAAT GGATGAAGTT ATCTACGAAG AGTTTAAAGG TACAGGTAAC
ATGGAACTAC ACCTTAACCG TAAGATTGCG GAAAAACGTG TATTCCCAGC TATCGACTTT
AACCGCTCAG GTACCCGTCG AGAAGAGTTA CTCACCGCGC AAGATGAACT ACAAAAAATG
TGGATCCTTC GCAAGATTGT TCACGAAATG TCTGAGATTG ACGCGATGGA CTTCCTTATT
AGTAAGTTGT CGATGACCAA GACGAACAAC GAGTTCTTCG ACGCAATGCG CCGACAAAAG
AGCTAG
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| Protein sequence | MNLTELKNKP ISELVNLAEE MGLENMARAR KQDIIFSILK THAKSGEDIF GDGVLEILQD
GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDTIAGK IRPPKDSERY FALLKIREVN
FDKPENSRNK ILFENLTPLH AADRLRMERG NGSTEDITAR VLDLASPIGK GQRGLIVAPP
KAGKTLLLQN IAQSIAANHP DCELMVLLID ERPEEVTEMH RLVQGEVVAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHKPKRF
FGAARNVEEG GSLTIIATAL IDTGSKMDEV IYEEFKGTGN MELHLNRKIA EKRVFPAIDF
NRSGTRREEL LTAQDELQKM WILRKIVHEM SEIDAMDFLI SKLSMTKTNN EFFDAMRRQK
S
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