| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00549 |
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| Symbol | psd |
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| ID | 6777847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 579926 |
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| End bp | 580903 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753981 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_002124861 |
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| Protein GI | 196155372 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATT GGCTTAAAGT TAATTTACAA TACGTTACCC CTAAGCATTT GCTTTCTCGC
CTTGTGGGTA AACTCGCTGA AGCAGAGATG GGTAGCGTGA CAACCTTTTT CATCAAGCTA
TTTATTAAGC AATACAATGT TGATATGACC GAGGCTCTTC ATGAAAAGCC CGAGCATTAC
CGAAGCTTCA ATAAATTCTT CACTCGTACG CTTAAGCCAG AAGCGCGCAC TATCGATGAA
AGTGACGATG TGCTAATCCA TGCTGTTGAC GGCACAGTGA GCCAGTTTGG CGATATCCGC
AGCGACAGCA TTTTCCAAGC GAAAGGCCAT GACTTCAGCC TTACCACGTT ACTAGGCGGA
AAACCTGATG TTGCCGCACC GTTTAAAAAC GGCAAGTTCG CAACAGTCTA CTTGGCGCCA
CGTGACTATC ACAGAATCCA TATGCCTATT GAAGGTACGC TAACTGACAT GCTGTACGTG
CCGGGCGAAC TGTTTTCGGT CAACCCGCTT ACTGCACAAA ATATTCCGGG CCTTTTCGCA
CGTAACGAAC GTGTTGTAGC GCTGTTCGAC ACCCCGGTGG GCAAAATGGC AATGGTATTA
GTAGGTGCTA CTATTGTGGC GAGTATCGAA ACGGTTTGGG CTGGCACGGT GACTCCACCT
ACAGGTAAGA CGGTCCAGCA CTGGTCGTAT GAAACTGATA GCGAAGCGGC GGTTAAGTTA
GAAAAAGGGG CTGAACTTGG GCGCTTTAAG CTAGGCTCAA CCATTGTAGT TTGTTTCGAA
AAAGACATGA TAGATTTCGA AGATATTGCC CCTGGCATGG TGACACGCTT AGGTGAGCCG
ATGGCTTCAA AAATGTCTTC ACAAAAAGCT ATTACACCAG AGCAAACTAC CGAAACTCCT
GTTCAAGCTA GCAACGAGTT TGATGACAAT GCTGGCGAAA CCAAGAAAGA TACACCTTCA
GAGGGCGCTG ACAGCTAA
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| Protein sequence | MLDWLKVNLQ YVTPKHLLSR LVGKLAEAEM GSVTTFFIKL FIKQYNVDMT EALHEKPEHY
RSFNKFFTRT LKPEARTIDE SDDVLIHAVD GTVSQFGDIR SDSIFQAKGH DFSLTTLLGG
KPDVAAPFKN GKFATVYLAP RDYHRIHMPI EGTLTDMLYV PGELFSVNPL TAQNIPGLFA
RNERVVALFD TPVGKMAMVL VGATIVASIE TVWAGTVTPP TGKTVQHWSY ETDSEAAVKL
EKGAELGRFK LGSTIVVCFE KDMIDFEDIA PGMVTRLGEP MASKMSSQKA ITPEQTTETP
VQASNEFDDN AGETKKDTPS EGADS
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