Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00545 |
Symbol | |
ID | 6777807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 576940 |
End bp | 577701 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753977 |
Product | hypothetical protein |
Protein accession | YP_002124857 |
Protein GI | 196155368 |
COG category | [S] Function unknown |
COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.671314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCATCTG AAATAGCGCA GCGCGCTGAA AAAGAGGGCA GGGCGGTAAT GCTGCATATG CCGATGCAGG CTCAAAATGG TAAAAATATG GGGCCCCTTG GGCTTTCAAC TGATATGTAC GCCGGTGCTA TTACACACAA TGTCCGCAGG GCAATGAAGA GCGTACCTAA CGCGGTGGGT ATCAACAACC ATATGGGAAG TGCCTTTACC GGGCAGCGAG AGGCGATGGA AGCGTTACTT AAAGAGGTGA AGCGTCAGGG GCTATTCTTT GTCGACAGCC GAACGACAGT ATTATCTAAA GGAAAGGAAA TTGCCGAACA ACTCGGTGTG CCTAACGCCA GTCGCCAAGT GTTCCTTGAT CACCGCTTAG AGCCTGCGTT TTTATTACAG CAATTCAATG AGATGAAGCG TATTGCTAAG CGTGAAGGAC GAGTTTTAGT TATAGGTCAC CCTCATCCTG CCACCATAGA CTTTTTGCAA ACGCATTTAC CACTACTTGA AAAAGAAGGC TTTAGCCTCG CCTCTGTGGC AGACTATTTT CCCGATGCAC CGAAAGTGGC GAAGCAGTTT CCAAATGTGC ATGAGCAAAC CGCAGGGCTT TCACACCACA TAATTGCCAG TAAAAACATT GCTGACAAAA ATATTACTCT GAAAAATAAT TTGGCTTTCA CGAATAAAGT AAGTTCAGAA AACCTAGAGC ACACTCGATA TAGCACGCGA AAAGTGTCGC CAGAAATCAC TGATGTTGCG CCAAAGGAAT AG
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Protein sequence | MASEIAQRAE KEGRAVMLHM PMQAQNGKNM GPLGLSTDMY AGAITHNVRR AMKSVPNAVG INNHMGSAFT GQREAMEALL KEVKRQGLFF VDSRTTVLSK GKEIAEQLGV PNASRQVFLD HRLEPAFLLQ QFNEMKRIAK REGRVLVIGH PHPATIDFLQ THLPLLEKEG FSLASVADYF PDAPKVAKQF PNVHEQTAGL SHHIIASKNI ADKNITLKNN LAFTNKVSSE NLEHTRYSTR KVSPEITDVA PKE
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