| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00504 |
|---|
| Symbol | |
|---|
| ID | 6777485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 535723 |
|---|
| End bp | 536544 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642753936 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002124816 |
|---|
| Protein GI | 196155327 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCA ACTTTGCGTT AATCAGTCCA AAAAAGAAAA CACAGACAGA AAAACGAATT
ATAACAAGTT TGAATTTTGA CTGGAGAACA CACATGAAAA CATCTACAAA AAGAACAATC
CTTGCCGCTG CAATTTCTTC AGCGTGTCTG TTAACAGCCA TGCCTAGCTA TGCAGAAGGT
GAATTTACTG CCAATGCAAG CGCGACCAGC AACTACATTT GGCGTGGTCT AACACAAACT
ACTAACGAAG CTGCTGTTCA GGGCGGTATC GACTACGCAC ACGAAAGTGG TTTTTATGCG
GGTACGTGGG CATCTAACGT GAACTATGGT GCAGGCGATG TATATTCATA TGAGCACGAC
ATGTACTTTG GTTTTTCTGG CGAGTCTGAC GGCATTGCTT ACGACTTTGG TTACCTTTAT
TACAACTACG ATGATGAAGC GAACTTTGAC TTCGCTGAAG TTTATGGCTC AGTAGGTATG
GGCGGCTTAA GCCTAACGGT TTACTTATTA GCACACACCG AAGCTGATGA AGGTGAAGGC
CAAGATTTTG GATTTGCTCA AGCATCTTAT ACGTCTCTTG ACTACGGCAT GGAAATTCTA
AATGGCACCG AACTTGGTTT CCACGTTGGT TATCACGAAG GTGACTTTGC GGAAGCGTTT
AACGGTGTTG AAGGTTATGT AGACTACGGC GTATCAATCG CGAAAGATGG CTTTAGCTTT
GCAATTACAG GGACCGACCT AGATGATATG GGCGGCGATG ATGAGTTTGA TAACGATGCA
GTTAAATTCA CTGTAGCTTA CTCAGTCGAC TTCCAGCTGT AA
|
|---|
| Protein sequence | MGINFALISP KKKTQTEKRI ITSLNFDWRT HMKTSTKRTI LAAAISSACL LTAMPSYAEG
EFTANASATS NYIWRGLTQT TNEAAVQGGI DYAHESGFYA GTWASNVNYG AGDVYSYEHD
MYFGFSGESD GIAYDFGYLY YNYDDEANFD FAEVYGSVGM GGLSLTVYLL AHTEADEGEG
QDFGFAQASY TSLDYGMEIL NGTELGFHVG YHEGDFAEAF NGVEGYVDYG VSIAKDGFSF
AITGTDLDDM GGDDEFDNDA VKFTVAYSVD FQL
|
|---|
| |