Gene MADE_00477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00477 
Symbol 
ID6777591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp501636 
End bp502271 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID642753909 
ProductAraC-type DNA-binding domain-containing protein 
Protein accessionYP_002124789 
Protein GI196155300 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCCA TTAATGGGCA TATCTTGATA GAAATCGATG TTTTTCGTGG GCGAGTAGGC 
GTCGGCGAGG GCGTATGTAT TGCGCCTAAC GAGGTTCATT ATTTTAGTGC TAATGAATTA 
TCAAAATTCA TTGTGGCAGA CTTGGAATAT GTGCCCGTTA GTTTAAATGA CAGGCTACAC 
CCTATTTTCC AAGTATCGTC AGCATTGCAA GCGTTTTTGT CATTCGTAGA AATTCAAATT 
AGTCAGTTTG CAGACCATGG ACATGAAGAG ATTTTGGCGC TGTTTTTAAC CTTGTTAGAG 
ACATCCTTGA AAGGATGTAG CATGGATAAG CGTATCACTC CCGTATTAAG TCATATTCAT 
CGCGATCTTG CCCGAGGCTT TACGCAAGTG AAGTTAGCGC AGATAGCTTG TATGGGAACA 
ACGCAGTTTA AAACGCGTTT CAAAGAAGCT ACCGGACTTA GTTTGCGAGA CTACCTGGTG 
AAAGCGAGAA TGGAAAAGGC CAAAGCGTTA CTGAGAAATA CCGATACGCC CATGTTGGGT 
ATAGCTCAGC TAACAGGGTA TGAAGATGTT GCAGCATTCA GTCGACGGTT CAAAGCATAT 
TTCGGGCAAC CACCTAAGTT TTTTAAGAGA AAGTAG
 
Protein sequence
MLPINGHILI EIDVFRGRVG VGEGVCIAPN EVHYFSANEL SKFIVADLEY VPVSLNDRLH 
PIFQVSSALQ AFLSFVEIQI SQFADHGHEE ILALFLTLLE TSLKGCSMDK RITPVLSHIH 
RDLARGFTQV KLAQIACMGT TQFKTRFKEA TGLSLRDYLV KARMEKAKAL LRNTDTPMLG 
IAQLTGYEDV AAFSRRFKAY FGQPPKFFKR K