Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00434 |
Symbol | |
ID | 6777967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 451506 |
End bp | 453191 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753863 |
Product | oxidoreductase |
Protein accession | YP_002124746 |
Protein GI | 196155257 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGTA ACGAATATGA TGCAATAGTT ATTGGATCTG GTATCAGTGG CGGTTGGGCT GCTAAGGAGC TAACTGAAAA GGGCCTAAAA GTGCTAATGT TAGAACGTGG CCAAAATATC GAGCATATTA AAGATTATAA AAATGCGCAT AAAGAGGATT GGGATTTTCC TCACCGAGAT CTGCCTACTC AGGCTATGAA AGTTGACTAC CCTGTGCTTA AGCGTGATTA CCCGCTAAAT GAAAAAACGT ACGGCATGTG GGCAAATGAA AAAGAAAATC CTTATACCGA AGACAAGCGC TTCGACTGGT ACAGAGGCTA CCACGTGGGT GGGCGCTCAC TGTTGTGGGG GCGTCAAAGC TACCGTTTGA ACAAAGAAGA TTTCGAAGCC AATGCTAAAG AAGGCATTGC AGTCGACTGG CCTATTCGCT ACGACGATTT GGCGCCATGG TATGACTACG TAGAAAAATT CGCGGGTATC AGTGGTAATC GCGATGGCTT AGATGTATTG CCTGATGGTG TATACCAGCC ACCAATGCCA ATGAACATTG TAGAGGAAAG TGTCGCGGCG CGGGTGAAAA AGGCCTATGA AGGCGCGCGG CACATGGTGC ATGGCCGCAC TTCAAACATG ACACAAAGCA AGCCCGAAGA AGGGCGTGTT CATTGCCAAT ACCGCAATAA GTGCTGGTTG GGTTGTCCTT TCGGTGGCTA CTTCAGTACA CAAGCATCTA CGCTTCCAGC TGCGGTTAAA ACAGGTAACT TAACCCTTCG ACCTTTTTCG ATAGTCAAAG AGATCTTGTT CGACAAAGAC AAGAAACGCG CGACTGGCGT TGAAATTATC GATGCTGAAA CCAACGAGAC CTATGTATTT AAAAGCAAGA TCATCTTTGT AAATGCGTCA GCACTTAACT CGGCGTGGGT ACTGATGAAT TCCGCCACAG ACGTATGGGA CGGTGGCTTA GGAAGCAGCA GCGGCGAGTT GGGTCACAAC GTTATGGATC ACCACTTTAG AGTCGGAGCT TCAGCTGAAG TTGAAGGTTT TGACGACAAA TATACCTACG GTCGCAGACC GAGTGGCTTC TATGTGCCAA GGTTTAGAAA CTGGGGAAGT GATAAACGAG ATTACTTGCG AGGATTTGGT TATCAAGGCG GCGCAAGCCG TTCAGGTTGG CGCAAAGACA TAGCTGAGCT TGGTATAGGT GCTGGACTTA AAGACGCATT AACAGAGCCA GGTCCTTGGA CAATAGGCAT GACAGCCTTC GGAGAAATTC TTCCGTATCA CGAAAACAAA GTGTACTTGA ATAAAAAAGT CACCGACAAA TGGGGCTTAC CAGTACTCGC AATGGATGTA GAGATTAAAG AAAACGAGCT TAAGATGCGT AAGGACATGC AGCAAGACGC TATTGAGATG TTTGAAGCGG CTGGCCTTAA AAATGTTCAA GGCTGGGATG CAGACTACGC ACCGGGTATG GGCATTCATG AAATGGGTAC GGCGCGTATG GGGAGAGATT CTAAAAGCTC TGTGCTCAAC GCGCATAACC AAGTATGGGA TGCACCAAAC GTATTCGTGA CCGATGGTGC AGCAATGACA TCGGCCAGCT GTGTTAACCC TTCACTGACC TATATGGCAT TAACGGCAAG AGCCGCAGAC TTTGCCGTAG AAGAGTTAAA GCGAGGAAAT CTATAA
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Protein sequence | MASNEYDAIV IGSGISGGWA AKELTEKGLK VLMLERGQNI EHIKDYKNAH KEDWDFPHRD LPTQAMKVDY PVLKRDYPLN EKTYGMWANE KENPYTEDKR FDWYRGYHVG GRSLLWGRQS YRLNKEDFEA NAKEGIAVDW PIRYDDLAPW YDYVEKFAGI SGNRDGLDVL PDGVYQPPMP MNIVEESVAA RVKKAYEGAR HMVHGRTSNM TQSKPEEGRV HCQYRNKCWL GCPFGGYFST QASTLPAAVK TGNLTLRPFS IVKEILFDKD KKRATGVEII DAETNETYVF KSKIIFVNAS ALNSAWVLMN SATDVWDGGL GSSSGELGHN VMDHHFRVGA SAEVEGFDDK YTYGRRPSGF YVPRFRNWGS DKRDYLRGFG YQGGASRSGW RKDIAELGIG AGLKDALTEP GPWTIGMTAF GEILPYHENK VYLNKKVTDK WGLPVLAMDV EIKENELKMR KDMQQDAIEM FEAAGLKNVQ GWDADYAPGM GIHEMGTARM GRDSKSSVLN AHNQVWDAPN VFVTDGAAMT SASCVNPSLT YMALTARAAD FAVEELKRGN L
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