| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00347 |
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| Symbol | |
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| ID | 6777307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 369047 |
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| End bp | 370924 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753776 |
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| Product | Ni-Fe hydrogenase large chain |
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| Protein accession | YP_002124659 |
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| Protein GI | 196155170 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA CAGCAAGTAA CAACCGGTTA GTCGTCGATC CTATCACTCG AATTGAAGGG
CATCTTCGAA TAGAAGCTGA AATGGATGGG AATACCATCA AACAGGCGTT CTCATCAGGC
ACGTCTGTTC GGGGAATTGA ACTGATTTTA CAAGGCAGAG ATCCGCGTGA CGCTTGGGCT
TTTGCGCAAC GTATCTGTGG CGTCTGCACG CTGGTGCATG GTATGGCATC GGTGCGTGCT
GTCGAAGATG CAATTAGAAA AGCTTGGCGG TCAAACGCAA AATTAGGGGT TGCCATTGGA
AAGCCCTCCA TGACATCTAT GCCAAAAGGA CCGATGCAAC ATGGTAAAAA AGGGCACCGA
CAGTCACGTA CTTCAATAGG CGTACTGAGT GAAGCAGAAA TGGCTATCCC TCAAAATGCA
CAACTGATAA GAAACATCAT GATTGCAACC CAATATGTGC ATGATCACGT GATGCATTTT
TATCACTTGC ATGCCCTAGA TTGGGTTGAC GTTGTTTCTG CACTAGATGC AGATCCAACG
AGAACCGCTA CGCTCGCCGG TCAATTGAGT GATTATCCTC GTTCATCGCC GGGATATTTC
AAAGATGTGA AGCAAAAAGT CAAAACGCTG GTTGAGTCTG GGCAGCTAGG GATATTCAGT
AACGCGTATT GGGGGCATCC TGGCTATAAA CTGCCACCTG AAGTTAACTT GATGGCATTA
GCACATTATT TAGATGCGCT AACGTGGCAG CGTGAAGTTG TAAAAGTTCA CACCATATTT
GGAGGGAAAA ACCCTCATCC TAATTTTGTC GTTGGCGGCG TGCCTTCACC GATTAATCTC
AATGCGTCAA CGGGTATTAA CACGAGTCGA TTAGTGCAAC TACAAGATGC TATCACGCAA
ATGAAGAGCT TTGTCGATCA GGTGTATTAC CCCGATATTG TGGCGATTGC GGGTTATTAC
AAAGAGTGGG GGACACGAGG GGAAGGGCTG GGTAACTTTC TTACCTATGG AGACTTACCT
ATGACATCAA TGGATGACCC TGATTCTTTC TTGTTTCCAC GAGGTGCAAT ACTTGGTCGA
GACTTGAGTA AAGTGCATGA CCTTGATCTA GATGATCCCT CTGAAATTCA AGAATTCGTC
TCTTCCTCCT GGTATCGATA TAGTGGAGGG AACGCAAGTG GTTTACACCC TTTTAATGGA
CAAACAACAC TCGAGTATAC TGGTCCGAAA CCGCCTTACA AGCACCTAAA TGTAGGGGCT
GAATATTCAT GGTTGAAAAG TCCGCGTTGG AAAGGCCATG CGATGGAGGT GGGACCGCTG
GCTCGCGTGC TAATGATGTA TGCTAAAAAA GATGCCGCTG CGCAAGACAT CGTTAATCGA
TCTCTTTCTA TCTTGGATTT AGAGACCTCT GCACTTTTCT CCACACTCGG TAGGACGCTC
GCCAGAGCAG TGGAAACAAA AATTGTGGTT AACCAGCTAC AGTCTTGGTA TGACCAACTA
TTGGATAATA TCGCAAAGGG CGATACCGAT ACGTTTAACC CTCTGTATTT TGACCCTACC
AATTGGCCAA TTAAAGGCCA GGGGGTAGGC GTGATGGAAG CGCCTCGTGG CGCGTTGGGG
CATTGGTTGG TCATGCAAAA TGGCAAAATT GAGAATTACC AATGTGTCGT GCCTACGACA
TGGAACGCTG GACCTCGAGA TCCCAACTCA CAGGCAGGTG CTTATGAAGC CGCTCTGCAA
GATAAACATA CGCTACATGA TCCTGACCAA CCTTTAGAGA TTTTGCGAAC ACTTCATAGT
TTTGACCCCT GCTTAGCATG TGCCGTGCAC GTAATGGACG AAACAGGGGA AGAGCGTTTG
CGTCTAAAAG TTCGTTAA
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| Protein sequence | MENTASNNRL VVDPITRIEG HLRIEAEMDG NTIKQAFSSG TSVRGIELIL QGRDPRDAWA
FAQRICGVCT LVHGMASVRA VEDAIRKAWR SNAKLGVAIG KPSMTSMPKG PMQHGKKGHR
QSRTSIGVLS EAEMAIPQNA QLIRNIMIAT QYVHDHVMHF YHLHALDWVD VVSALDADPT
RTATLAGQLS DYPRSSPGYF KDVKQKVKTL VESGQLGIFS NAYWGHPGYK LPPEVNLMAL
AHYLDALTWQ REVVKVHTIF GGKNPHPNFV VGGVPSPINL NASTGINTSR LVQLQDAITQ
MKSFVDQVYY PDIVAIAGYY KEWGTRGEGL GNFLTYGDLP MTSMDDPDSF LFPRGAILGR
DLSKVHDLDL DDPSEIQEFV SSSWYRYSGG NASGLHPFNG QTTLEYTGPK PPYKHLNVGA
EYSWLKSPRW KGHAMEVGPL ARVLMMYAKK DAAAQDIVNR SLSILDLETS ALFSTLGRTL
ARAVETKIVV NQLQSWYDQL LDNIAKGDTD TFNPLYFDPT NWPIKGQGVG VMEAPRGALG
HWLVMQNGKI ENYQCVVPTT WNAGPRDPNS QAGAYEAALQ DKHTLHDPDQ PLEILRTLHS
FDPCLACAVH VMDETGEERL RLKVR
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