Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00315 |
Symbol | |
ID | 6775443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 343798 |
End bp | 344481 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642753744 |
Product | probable two component response regulator transcription regulator protein |
Protein accession | YP_002124627 |
Protein GI | 196155138 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC TTGTAGTCGA AGACGAAGTA AAAACGGGCG ATTACATCAA ACAAGGGCTC ATTGAATCCG GCTTTGTTGT AGAATTAGTA AGGACTGGCC TGGATGGTCA CCACAAATCG ATGATTGGTG ATTATGAATT AATCGTACTC GATGTAATGC TGCCCGACAT AGAAGGTTGG AAAATCCTGT CTTCATTGAG AGAATCTGGT AAATTTACAC CCGTTCTTTT TTTAACCGCT CGCGATCACG TTAATGACAG AGTCAAAGGA CTTGAGTTAG GCGCAGACGA TTATTTGGTT AAACCGTTTG CTTTCGCGGA ACTCCTCGCA AGAGTGCGCA CCTTGATCAG GAGAGGGACG TCTGTCCCTA ACAACACGTT ACACATTGCA GATTTGGAGC TTGATATCCC TTCTCGCGTT GCGAAGCGCG GTGGCAAAGT AATCAATCTG ACGACTAAAG AGTTTACATT GCTTGAACTA ATGGTCAGAC GTCAAGGTGA AGTATTGCCC CGTTCTTTGA TCGCCTCTCA GGTATGGGAC ATGAATTTTG ACAGTGACAC GAATGTCATT GATGTCGCTA TCCGAAGATT GCGCGCAAAA ATTGATGATG ACTTTCCTGT AAAGCTAATT CAAACTGTCA GGGGGATGGG CTATAAAATG AGTGTAGATG ATAGTAACGA ATAA
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Protein sequence | MKILVVEDEV KTGDYIKQGL IESGFVVELV RTGLDGHHKS MIGDYELIVL DVMLPDIEGW KILSSLRESG KFTPVLFLTA RDHVNDRVKG LELGADDYLV KPFAFAELLA RVRTLIRRGT SVPNNTLHIA DLELDIPSRV AKRGGKVINL TTKEFTLLEL MVRRQGEVLP RSLIASQVWD MNFDSDTNVI DVAIRRLRAK IDDDFPVKLI QTVRGMGYKM SVDDSNE
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