| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00258 |
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| Symbol | |
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| ID | 6776738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 277860 |
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| End bp | 278351 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642753686 |
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| Product | MSHA pilin protein MshA |
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| Protein accession | YP_002124570 |
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| Protein GI | 196155081 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAG TTTCAACACA AAAGGGTTTT ACCCTAATCG AGTTAATCAT CGTTATTGTC
CTGCTGGGTA TCCTTGCGGT AACAGCAGCA CCTAAGTTTT TAAACCTTCA AGATGATGCA
CGTGACTCTG TATTACAGGG CATCGCTGGG TCAATTGAGT CAGCCGCCTC CATTGTGTAC
GGAAAAGCGC TTATCCAAGA TGCAGCTGGT AGCGCAGATT CGTCTGTAAC TGTTGACGGT
ACAACATTAG ACGTTGTTTA CGGTTACCCA GATGCAAGCG ATGTTGCCAA TTTAACAGCC
ATCATTGAGG TCGATTTGGG CGCAGAGAGT GATTATGCTG CTGTTTCAAA CGATACAGAT
ACAGTGACAA TATACTATAC TGGCGACTAT GATGAAGCGC CAGATCCAGG CGCTGCATGT
TCTCTCTCGT ATGTTAACTC TGGAGCTGAG GGCGAGCGTC CAGCTATTAC GGTTACGCCT
TGCGAAGGTT AA
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| Protein sequence | MQKVSTQKGF TLIELIIVIV LLGILAVTAA PKFLNLQDDA RDSVLQGIAG SIESAASIVY
GKALIQDAAG SADSSVTVDG TTLDVVYGYP DASDVANLTA IIEVDLGAES DYAAVSNDTD
TVTIYYTGDY DEAPDPGAAC SLSYVNSGAE GERPAITVTP CEG
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