| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00223 |
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| Symbol | |
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| ID | 6776109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 235942 |
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| End bp | 238773 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642753651 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_002124535 |
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| Protein GI | 196155046 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.44866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA TCGAAATTCG CGGTGCTCGC ACCCACAACT TGAAAAACAT CGATTTAACA
CTGCCACGAG ACAAACTGGT GGTGATAACC GGCCTTTCTG GCTCGGGTAA ATCGTCTCTA
GCATTTGACA CGCTATACGC AGAAGGCCAA CGACGTTACG TTGAGTCTTT GTCTGCCTAT
GCCCGTCAGT TCCTTTCCAT GATGGAAAAA CCCGATGTTG ATCATATTGA GGGTTTATCG
CCTGCAATAT CCATTGAGCA AAAATCAACG TCACACAACC CTCGCTCTAC CGTAGGTACC
ATCACCGAAG TTTACGATTA CTTGCGACTG ATGTTTGCCC GTGTAGGTAC GCCTCGCTGC
CCTGATCACG ATGTACCGCT AGACGCCCAG ACCGTCAGTC AAATGGTGGA TAAAGTGTTG
GCGATGCCAG AAGGCAGTAA GCTAATGCTA TTAGCGCCTA TCGTTAAAGA GCGTAAAGGT
GAACACGTAA AAGCTTTGCA AAACCTCTCA GCACAGGGCT TTATTCGTGC GCGCATTGAT
GGAGAGGTAT GTGACCTATC GGATCCGCCG CCGCTAGACC TGCACAAGAA GCACACCATC
GAAGTGGTGG TAGATCGTTT CAAGGTGCGC GACGATATGG CACTGCGTTT GGCTGAATCA
TTCGAGACGG CGCTTAGCCT TGCTGGCGGC AACGCGGTTG TGGCTGATAT GGACGATAAA
GACGCAGAAG AAATTGTATT TTCTGCCAAC TTCGCCTGTC CACACTGCGG TTACAGCATT
AGTGAACTTG AACCTCGTCT GTTTTCATTT AATAACCCAG CGGGTGCATG CCCAACTTGT
GACGGGCTAG GTACAAGACA GTTTTTTGAC CCAGCACGCG TAGTCGGCAA TACCGAATTA
AGTTTGTCTG GCGGCGCTAT TCGCGGATGG GACAAGCGCA GCTATTACTA TTTTCAAATG
CTACAGGCAG TAGCAGACCA TTATAAATTT AGCCTTACCG CACCATTTGA AGAGCTCGAT
AAAAAGCACC AAGACATTGT GCTTTATGGG TCTAAAGGCA AGTCGCTGTC GTTTAAGTAC
ATAAACGAGC GTGGCGACGT GATGGAGCGT AAGCATCCAT TTGAGGGCAT TATCCCTAAT
ATGGAACGTC GCTATCGAGA GACCGAGTCG AATTCGGTGC GTGAAGAGCT AGCAAAATAT
TTAAGCCAGC AGCACTGCAG CAGCTGTAAC GGCACGCGTC TGCGTGTTGA AGCACGTCAT
GTATTTATAC AAGACACCAA CCTGCCAGCC ATTGCTGACA TGTCGATTGC CGATGCATAC
GGCTTCTTCG AGACACTGAA ACTTGAAGGT CAACGTGCTC AGATAGCCGA AAAGATTTTG
AAAGAAATCA TGGACCGCTT GCGCTTCTTG GTAAACGTAG GTCTTAACTA TCTTTCTATG
TCGCGCAGCG CCGATACTCT ATCGGGCGGT GAAGCTCAGC GCATTCGACT GGCAAGTCAA
ATTGGCGCAG GCTTAGTGGG CGTTATGTAC GTGCTGGATG AGCCCTCTAT CGGTCTTCAT
CAACGGGATA ACGAACGCCT ACTTGGCACG CTTACACACT TGCGCGATCT AGGTAACACC
GTGTTAGTTG TAGAGCACGA CGAAGATGCC ATTCGCGAAG CCGATTACAT TGTAGATATC
GGCCCGGGGG CGGGTGTGCA TGGTGGTGAG ATTATCGCCG AAGGTTCGCT TGAAGATATC
AAAAACAGTG AACACTCACT TACTGGAAAA TACTTATCTG GTAGAGAGAA GATAGATATC
CCTGCAACAC GCACACCGGT TAAAGACGAC AAGTGGCTAG AGCTTTTAGG CGCTACCGGT
AACAACTTGA AGTCTGTTGA TTTACGTATA CCTACTGGTG TAATGACCTG TGTAACCGGT
GTATCGGGCT CGGGCAAATC AACGCTGATT AATGACACTT TCTACAAAAT AGCGCAGCGC
GAGCTGAACA AGGCGACTAC TTCTGAACCG GCACCGCATA AGTCGATGAC CGGATTAGAT
CAGCTCGACA AAGTGGTCGA TATTGACCAA AGCCCTATCG GCAGAACACC GCGCTCTAAT
CCGGCGACTT ACGCAGGCAT TTTCACTCCA ATTCGTGAAA TGTTCGCCGG TACACAAGAG
TCGCGTTCAC GGGGTTACAA GCCTGGCCGC TTTAGCTTTA ACGTAAAAGG CGGTCGCTGT
GAGGCGTGTC AGGGTGACGG TGTAATTAAA GTGGAAATGC ACTTTTTGCC AGACGTGTAT
GTGCCTTGTG ACGTATGTCA GGGCAAACGC TATAACCGTG AAACCCTTGA GATAAAGTAC
AAAGATAAGA ACATTCACGA AGTGTTGGAA ATGACGGTGG AAGATGCCCG TCAGTTCTTC
GATGCTATTC CGGCTATTTC ACGTAAATTG CAGACCCTAA TGGACGTTGG CTTGTCATAT
ATTCGTCTAG GCCAAGCAGC CACTACGTTA TCAGGTGGTG AAGCACAGCG CGTGAAATTA
GCGAAAGAGT TGTCAAAAAG AGACACTGGG CAAACACTCT ATATCTTGGA CGAACCAACC
ACCGGGTTGC ACTTCCACGA TATTAAACAG TTATTAGCCG TCCTTCACAG GCTGCGCGAT
CACGGTAATA CCGTTGTGGT TATTGAGCAT AACCTAGATG TGATTAAAAC CGCAGACTGG
ATTGTTGACC TTGGACCCGA AGGTGGATCC GGAGGTGGCC AGATTATTGC AGAGGGAACA
CCTGAGCATG TGGCACAACA AGAAGTTTCA CATACAGGTC GATTCCTGAA ACCCATGCTC
ACACAAGCTT GA
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| Protein sequence | MDKIEIRGAR THNLKNIDLT LPRDKLVVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSMMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEVYDYLRL MFARVGTPRC
PDHDVPLDAQ TVSQMVDKVL AMPEGSKLML LAPIVKERKG EHVKALQNLS AQGFIRARID
GEVCDLSDPP PLDLHKKHTI EVVVDRFKVR DDMALRLAES FETALSLAGG NAVVADMDDK
DAEEIVFSAN FACPHCGYSI SELEPRLFSF NNPAGACPTC DGLGTRQFFD PARVVGNTEL
SLSGGAIRGW DKRSYYYFQM LQAVADHYKF SLTAPFEELD KKHQDIVLYG SKGKSLSFKY
INERGDVMER KHPFEGIIPN MERRYRETES NSVREELAKY LSQQHCSSCN GTRLRVEARH
VFIQDTNLPA IADMSIADAY GFFETLKLEG QRAQIAEKIL KEIMDRLRFL VNVGLNYLSM
SRSADTLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLGT LTHLRDLGNT
VLVVEHDEDA IREADYIVDI GPGAGVHGGE IIAEGSLEDI KNSEHSLTGK YLSGREKIDI
PATRTPVKDD KWLELLGATG NNLKSVDLRI PTGVMTCVTG VSGSGKSTLI NDTFYKIAQR
ELNKATTSEP APHKSMTGLD QLDKVVDIDQ SPIGRTPRSN PATYAGIFTP IREMFAGTQE
SRSRGYKPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDVY VPCDVCQGKR YNRETLEIKY
KDKNIHEVLE MTVEDARQFF DAIPAISRKL QTLMDVGLSY IRLGQAATTL SGGEAQRVKL
AKELSKRDTG QTLYILDEPT TGLHFHDIKQ LLAVLHRLRD HGNTVVVIEH NLDVIKTADW
IVDLGPEGGS GGGQIIAEGT PEHVAQQEVS HTGRFLKPML TQA
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