Gene MADE_00185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00185 
Symbol 
ID6776011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp197117 
End bp198964 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content47% 
IMG OID642753613 
Productfused 4-Hydroxybutyrate CoA-transferase/acetyltransferase domain of GNAT 
Protein accessionYP_002124497 
Protein GI196155008 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGA CATGTAGTTT ACCTCAAGCG CCACAGTGGT CTTCTTTAAT TAAATCTGGT 
TGCCGTGTCT TTGTTGGCGG GAACGCGTCA GTACCTCACG CACTCGTGCA GCACCTTATT
GATAACAGCG AAGGTTTTAG TGATATAGAG CTTGTGCACA TGCTGGCATT AGGCGACACC
CGCTGGGTGA AAGAAGAGTA CAAAAATTTA TTTAAAGCGA ACACCTTCTT TATTGGTGGT
GATACGATGC GCAAGGCCGT AGATGAAGGG CGCGCAGATT ATACGCCGGT TTTCCTGTCT
GAAATTTCAA GTTTGTTCAG CGATGGTACC CTTGCCCTTG ATGCAGCGCT AGTGAACGTA
AGCCCCCCTG ATGAATTTGG CTATTGCTCG TTGGGGCCTG CGGTAGATAT CGCTATGTCG
GCCATTAGGC AAAGTAAAAA AGTCATCGCC CAAATTAACC CGCAAGTGCC TAGAACATCT
GGGCACTCCT ATATTCACAT TAGTGAAATT ACCGCCTGTA TCGAGGCAGA AGAGCCACTG
GTTGAGGTGT CGCCGCCGCC AATAGATTCG GTCGCTGAAC GGATAGGGCA GTATGTTGCT
ATGCTTGTTG ACGACGGGGC GACGTTGCAA TTTGGTATTG GCAAAATTCC CAGCGCCACC
TTAAAGTATT TGTGTAATCA CAAAGACCTG GGTATTCACA GCGAAATGCT GACCGACAGC
ATTATCGAAC TGTTGGAGTC GGGCGCAATT ACGAATAAAA AGAAGACCTT TCACCCGGGT
AAGATCGTCA CGAGCTTTGC TATTGGCACG CGTAAACTTT ACGACCTAAT TGATAGTAAC
CCTCATATTG AATTTTACCC AAGCAGCTAT GTGAATAAGC CTACTAACAT AGCCAAAAAC
GATAATATGG TGGCGATAAA CAGCGCATTA GAAGTGGATT TAACCGGGCA AGTGGTGGCC
GACTCTCTAG GGTATGACTT TTACAGCGGC ATTGGCGGGC AGGTAGACTT TGTCACTGGC
GCGTCTATCA GCAAGGGCGG AAAGGCGATC ATCGCGCTGC CGTCTACGGC AAAAAATGAA
ACCATTTCTC GGATAACTCC GCGTATCAGT GAAGGTGCAG GCGTAGTAAC GTCCAGGGGC
AACGTGCAGT ATGTGGTAAC GGAGTACGGC ATTGCGTCGC TTAAAGGCAA AAGCATTCGT
GAGCGTGCAT TAGAGCTTAT TCGTGTTGCT CACCCTAAAT TTCGCGCAGC CTTGCTAGAA
GAAGTTCGTC AGCATTATTG GGTGCCTCAT TACCAAGAAA AGTACCCTAC CGATATACCC
GAATTAGGTG CTATACAGCT TAAAAAGCTC AACATACAAG GCGAAACCTT CTATATGCGG
CCCTTGAACC CCGCTGATGA GCGGCGTCTT CAAGAGTTTT TCTATTCCCA TACCAAAGAA
ACGCTGAGGC TGCGTTATAA CTACGACCCT AAACAAATGT CTCGTGAAAA GTCATGCAAT
TTGGTGTCGG TGGATCAAAG CGCTGATGCT GCCTTATGCA TTGTAAGGCA AGAAGGCTCT
CGCATTACCA TTCATGCGGT GGGACGTTTT TACTATAACC CTGATGACAA TACCTGTGAG
GCGGCGTTTG TAACCAGGGA AACCCAGCAG GGCAAAGGGA TGGCAAGTCG GCTTTTAAAC
GAGCTTATCA ACGTTGCCAA GGTACGGGGC ATTGCAAAAA TGATGGCCTA TGTACGCGGT
GATAACAGTC CGATGATAGC CATATTTGAA CAGGCCCAAT TCAAAAGAAA ATTTACTGGC
GACCCCAGTG ACATAGAATT AGTACTCGAT GTGGCTTCAC TGACATGA
 
Protein sequence
MEMTCSLPQA PQWSSLIKSG CRVFVGGNAS VPHALVQHLI DNSEGFSDIE LVHMLALGDT 
RWVKEEYKNL FKANTFFIGG DTMRKAVDEG RADYTPVFLS EISSLFSDGT LALDAALVNV
SPPDEFGYCS LGPAVDIAMS AIRQSKKVIA QINPQVPRTS GHSYIHISEI TACIEAEEPL
VEVSPPPIDS VAERIGQYVA MLVDDGATLQ FGIGKIPSAT LKYLCNHKDL GIHSEMLTDS
IIELLESGAI TNKKKTFHPG KIVTSFAIGT RKLYDLIDSN PHIEFYPSSY VNKPTNIAKN
DNMVAINSAL EVDLTGQVVA DSLGYDFYSG IGGQVDFVTG ASISKGGKAI IALPSTAKNE
TISRITPRIS EGAGVVTSRG NVQYVVTEYG IASLKGKSIR ERALELIRVA HPKFRAALLE
EVRQHYWVPH YQEKYPTDIP ELGAIQLKKL NIQGETFYMR PLNPADERRL QEFFYSHTKE
TLRLRYNYDP KQMSREKSCN LVSVDQSADA ALCIVRQEGS RITIHAVGRF YYNPDDNTCE
AAFVTRETQQ GKGMASRLLN ELINVAKVRG IAKMMAYVRG DNSPMIAIFE QAQFKRKFTG
DPSDIELVLD VASLT