Gene MADE_00157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00157 
Symbol 
ID6777913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp167887 
End bp168594 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID642753585 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_002124469 
Protein GI196154980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCTG AGCGTTACCA GCGCATTAGA GATGTGTTGG AAAAAAGGCA AACCGACCTT 
ACGGTATGCC TTGAAAATGT GCATAAGCCC CATAATGTTT CTGCCATAGT GCGAACCTGT
GATGCCGTGG GTATTCACAG GGTTCACACC GTATGGGAAA AGAAATATCA GTTTCGTCGC
GGTACGGCAA TGGGCAGTCA GCAGTGGGTG CGCCAGACTA ACCATGATGG CATTAACGAT
GCGATGGCTG AGCTTAAAGG TCAAGGCATG CAGGTGTTGG TTACCCATTT ATCTGATACG
GCGGTAGATT TTCGTGATGT GGATTACACC AAGCCGACCG CTATATTATT TGGTCAAGAA
AAATACGGTG CCACTGATGA AGCCAAGGCG CTGGCCGATC AGGATATCGT CATTCCTATG
ATGGGCATGG TGCAGTCGCT AAACGTGTCG GTGGCCGCAG CGTTAGTGCT TTATGAAGCG
CAGCGCCAGC GCACTATTGC GGGTATGTAC AATACACAGC AGTTGCCGGA AGAAGAGTGC
CAGGCTTTGG CATTTCAAAA TGGTTATCCT CGCTTGTATA AACTCTGCCA ACGCAAAGGC
TTGCCACTGC CTGCGATTAA CGCTATCGGT GAAGTGGATG CCGACGATAG CTGGTGGCGA
GAAATGCAAA TTACCAAAGC GGAAGCTGAC GCATTAGAAG CAGGCTAA
 
Protein sequence
MSPERYQRIR DVLEKRQTDL TVCLENVHKP HNVSAIVRTC DAVGIHRVHT VWEKKYQFRR 
GTAMGSQQWV RQTNHDGIND AMAELKGQGM QVLVTHLSDT AVDFRDVDYT KPTAILFGQE
KYGATDEAKA LADQDIVIPM MGMVQSLNVS VAAALVLYEA QRQRTIAGMY NTQQLPEEEC
QALAFQNGYP RLYKLCQRKG LPLPAINAIG EVDADDSWWR EMQITKAEAD ALEAG