Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00155 |
Symbol | |
ID | 6776393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 165361 |
End bp | 167472 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642753583 |
Product | bifunctional (p)ppGpp synthetase II/guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase |
Protein accession | YP_002124467 |
Protein GI | 196154978 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.195557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTGT TTGAAGGTTT AAAGCAGAAA GTTTTAGAGT ATTTATCAGC CGACCGTGTT CAGCTGGTGC AAGATGCTTT TGTTCTCGCT CAAGAGGCCC ATGACGGCCA AATGCGCTCC AGCGGCGATC CGTATATCAC TCACCCGGTA GCGGTGGCAG GCATTCTTGC CGATATGCAC CTTGATCATG AAACGATCAT GGCGGCACTG CTTCACGATG TCATAGAAGA TACCCATTAT AGCCAAGAAG ACCTTGCCGA GGCCTTTGGC GATACGGTTG CTGAGCTGGT AGAAGGGGTC AGTAAACTCG ACAAGCTTGC CTTTAGCACC AAACAAGAAG CCCAGGCGGA AAACTTCCGC AAAATGATGA TGGCCATGGT GCAAGACATC CGAGTTATCC TCATTAAACT GGCCGATCGC ACACATAACA TGCGTACGCT AGGCTCTCTG CGCCCTGATA AGCGCCGCCG CATTGCCCTA GAAACGCTAG AGATTTACGC CCCTATAGCT CATCGCTTGG GTATTCACGA TATTAAAAAC GAGCTGGAAG ATTTAGGTTT CCAAGCCATG TACCCCATGC GCCATCGCGC ATTGAAATCG GCGGTACGCC AAGCCCGTGG TAATCGCAAA GAGATTATCG AGAATATTCG TGGAGAACTG AATACGCGTC TAGATGCCTA CGAAATAACA TCAAACGTGA TAGGCAGAGA AAAACACCTG TACTCCATTT ACCGCAAAAT GAAAAACAAA GAACTGATGT TCAACGAGGT AATGGATATT TATGCGTTTC GCATTGTGGT GAGTTCGGTA GACAACTGCT ACCGCGCACT AGGCGCTATG CACGGGCTAT ACAAGCCTAT TGAAAACCGT TTTAAAGACT ATATCGCTAT TCCGCGTACT AACGGCTACC AGTCGTTACA TACATCGCTG ATTGGCCCGC ATGGTATTCC TGTTGAAATT CAAATTCGAA CACAGGAAAT GGACCAAATG GCGGATAAAG GGGTAGCAGC ACACTGGCTT TACAAGGAGC CGGGTGACAA CGGTACTACT GCACAGCTTC GTGCACGTAA GTGGATGCAA AGCTTGTTAG AACTGCAGCA GTCGGCAAGC TCGTCGTTTG AATTCATCGA GTCGGTCAAA ACCGACCTTT TCCCTGATGA AATTTACGTG TTTACGCCAG ACGGACGTAT TATAGAACTA CCTACAGGCG CAACGGCCGT GGATTTTGCC TACGCCGTAC ACTCTGACGT GGGCAACACG TGCGTAGGTG TGCGCGTTGA ACGGCGCAAC TTCAGCTTAA GTAAGCCGCT GCAAAATGGG CAAACCGTCG AGATTATTAC CTCTCCAAAA GCGAAGCCGA ATGCGAATTG GCTCAATTTT GTGGTGAGTG CTCGCGCGCG TACCCGTATT CGCCAGTATC TGCGTAAACA GCATTCACAA GAAGCGGTGA ACATGGGTAA TCGTCTACTT CGTCATGCGT TAGGTAGCGT GAAACTCGAT GATATTCCAA ATGCAGATAT AGAACGGGTT GTAGCAGAAA CTAAGCATGC AAACTTCGAC GACTTGCTAG TAGACATTGG CCTTGGCAAC GAACTAAGCG CTATTGTTGC TCGCCGTTTG TTAGGCGAAA GCACCACTGA TTTGTCAGAC AAAAAGGGCA ATGTGGCTAT TCGCGGTACA GAAGGCCTGC TTGTGCACTA CTCTCGTTGT TGCCACCCTA TTCCTGATGA TGAAATTGTG GCGGTATTAA GCCCGGGGCG CGGTATGACC ATTCATCAGA TTGGTTGTAA TAACATTCGC AAACTCACCC GTGAAGAGCC GCAACGTGTG CTGCCCATGC AGTGGGACGA CAACCCGCAG GGTGAATTCA AAGCGTCGTT ACGCATTGAA TTAATTAACC ATCAGGGCAC ACTGGCAACT TTAACGAACA CCATTTCAGG CTGCGATTCC AACATCATTG GTCTGCAAAC TGAAGAGAAA GAGAGTAATA TCTACTTTAT TGACCTAGAA CTTACCACAC ACAACCGTGT GCACTTGGCC CGCGTAATGA AGAAAATACG CACCATGCCG GAAGTTCAGA AAGTGTCTCG TCATAGTCAA TCACGACACT AA
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Protein sequence | MYLFEGLKQK VLEYLSADRV QLVQDAFVLA QEAHDGQMRS SGDPYITHPV AVAGILADMH LDHETIMAAL LHDVIEDTHY SQEDLAEAFG DTVAELVEGV SKLDKLAFST KQEAQAENFR KMMMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAL ETLEIYAPIA HRLGIHDIKN ELEDLGFQAM YPMRHRALKS AVRQARGNRK EIIENIRGEL NTRLDAYEIT SNVIGREKHL YSIYRKMKNK ELMFNEVMDI YAFRIVVSSV DNCYRALGAM HGLYKPIENR FKDYIAIPRT NGYQSLHTSL IGPHGIPVEI QIRTQEMDQM ADKGVAAHWL YKEPGDNGTT AQLRARKWMQ SLLELQQSAS SSFEFIESVK TDLFPDEIYV FTPDGRIIEL PTGATAVDFA YAVHSDVGNT CVGVRVERRN FSLSKPLQNG QTVEIITSPK AKPNANWLNF VVSARARTRI RQYLRKQHSQ EAVNMGNRLL RHALGSVKLD DIPNADIERV VAETKHANFD DLLVDIGLGN ELSAIVARRL LGESTTDLSD KKGNVAIRGT EGLLVHYSRC CHPIPDDEIV AVLSPGRGMT IHQIGCNNIR KLTREEPQRV LPMQWDDNPQ GEFKASLRIE LINHQGTLAT LTNTISGCDS NIIGLQTEEK ESNIYFIDLE LTTHNRVHLA RVMKKIRTMP EVQKVSRHSQ SRH
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