Gene MADE_00154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00154 
SymbolrpoZ 
ID6776284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp164945 
End bp165217 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content45% 
IMG OID642753582 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_002124466 
Protein GI196154977 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0430538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG TAACTGTAGA AGATGCCGTA GATAAAATTG GTAACCGCTT TGACCTAGTG 
CTTGTTGCTG CACGCCGTGC ACGTCAAATT GCCACTGAAG GCAAAGATCC TATGGTTGAC
GTTCAAAACG ACAAGCCAAC TGTGACAGCA CTTCGTGAAA TTGAAGAAGG TTTAGTAACG
GCTGCTACGC TTGAACAAGC AGACCTTCAA GCGCAAGAAC AGCAAGAACA CGCTGAATTT
GCGTCTGTTG CAAATATTTT ATCTGATCAG TAA
 
Protein sequence
MARVTVEDAV DKIGNRFDLV LVAARRARQI ATEGKDPMVD VQNDKPTVTA LREIEEGLVT 
AATLEQADLQ AQEQQEHAEF ASVANILSDQ