Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00154 |
Symbol | rpoZ |
ID | 6776284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 164945 |
End bp | 165217 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753582 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_002124466 |
Protein GI | 196154977 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0430538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCG TAACTGTAGA AGATGCCGTA GATAAAATTG GTAACCGCTT TGACCTAGTG CTTGTTGCTG CACGCCGTGC ACGTCAAATT GCCACTGAAG GCAAAGATCC TATGGTTGAC GTTCAAAACG ACAAGCCAAC TGTGACAGCA CTTCGTGAAA TTGAAGAAGG TTTAGTAACG GCTGCTACGC TTGAACAAGC AGACCTTCAA GCGCAAGAAC AGCAAGAACA CGCTGAATTT GCGTCTGTTG CAAATATTTT ATCTGATCAG TAA
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Protein sequence | MARVTVEDAV DKIGNRFDLV LVAARRARQI ATEGKDPMVD VQNDKPTVTA LREIEEGLVT AATLEQADLQ AQEQQEHAEF ASVANILSDQ
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