Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00153 |
Symbol | gmk |
ID | 6778727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 164133 |
End bp | 164774 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753581 |
Product | guanylate kinase |
Protein accession | YP_002124465 |
Protein GI | 196154976 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0558456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAC TACTTGGCAA TTTATTTATA CTTGCAGCTC CTTCAGGGGC GGGAAAATCT AGCCTTATAA AGGCGCTAAT GGAAAAGTAC GAAGGTAATG AAACTACGCC TATGCAGGTG TCGGTATCTC ATACCACGCG TCAGCCTCGT CCGGGTGAAG TAGACGGCGT ACACTACCAC TTTGTAAGTC GAGAGCAGTT TGAAGCGCTT ATCGAACAAG GCGTATTTTT TGAGTACGCA GAGGTGTTCG GCAATTATTA CGGCACATCA CGGGTTACCA TTGAACAAAC CCTTCACCGC GGAATTGATG TGTTTTTGGA TATCGATTGG CAAGGTGCTC GCCAAGTCAA AAAGCTTATG CCAGATACCT GTGGTATTTT CATTCTTCCT CCGTCGCTAG ATGTTCTTGA GCAGCGTTTA AATAACCGCG GTCAGGACAG TGAAGAAGTC ATTGCTGGGC GCATGGCACA AGCGGTGGCG GAAATGTCAC ACTTTAGTGA GTTCGATAGC GTAATTGTTA ACGATGACTT TGCCACAGCA CTAGGTGACT TAGAAGCGAT AGTGACTGCG CAGCGTCTTC GTACGATGAA ACAACAAATG CGTCATCAGG TGCTATTGGA CGAATTGCTT GGTAGCGCGT AA
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Protein sequence | MASLLGNLFI LAAPSGAGKS SLIKALMEKY EGNETTPMQV SVSHTTRQPR PGEVDGVHYH FVSREQFEAL IEQGVFFEYA EVFGNYYGTS RVTIEQTLHR GIDVFLDIDW QGARQVKKLM PDTCGIFILP PSLDVLEQRL NNRGQDSEEV IAGRMAQAVA EMSHFSEFDS VIVNDDFATA LGDLEAIVTA QRLRTMKQQM RHQVLLDELL GSA
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