Gene MADE_00150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00150 
SymbolhemC 
ID6775251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp160865 
End bp161803 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content49% 
IMG OID642753578 
Productporphobilinogen deaminase 
Protein accessionYP_002124462 
Protein GI196154973 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.413704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATC TCAACACCAC CCGCACCGTT CGAATTGCTA CTAGAAAAAG TGCCTTAGCG 
CTTTGGCAAG CAGAGTATGT GAAGGCAAAA TTGTTGGAGC ATTACCCATC AATGACCGTT
GAGCTTGTGC CCATGAGCAC CCAAGGCGAT AAAATTCTCG ATACGCCGCT GGCCAAAATT
GGCGGCAAAG GCCTTTTTAT CAAAGAGCTT GAAATTGCCA TGCTTGAAGG CCGTGCCGAT
ATTGCTGTGC ACTCAATGAA AGACGTACCG GTAGAATTCC CGGAAGGCTT TGGGTTACAC
GCTATATGTG AGCGTGAGAA TCCGTTCGAT GCCTTCGTGT CTAACAACCA CGACAGCCTA
GATGCACTGC CAGAAGGCGC AATAGTGGGT ACATCTAGCC TACGCAGACA ATGTCAAATT
CGCAAATACC GCCCTGATCT AATCATCAAG GACCTTCGCG GTAACGTAAA TACCCGTTTA
GCTAAGCTTG ATGCAGGCGA ATACGACGCC ATTATTTTAG CCTCTGCAGG GCTTATTCGC
CTTAAAATGC AATCGCGTAT TCGCATGGCT CTGCCTGCTG ACATCTCTCT TCCGGCTGTA
GGCCAAGGCG CTGTAGGCAT TGAATGTCGC AACGACGATG AAGAACTAAT AGCGCTACTT
CAAGCATTAA ACCACGCAGA TACGCACACC CGTGTTACTG CAGAACGCGC CATGAATGAA
AGGCTAGAAG GCGGATGCCA AGTCCCTATT GGCAGTTTTG CTACACTGGA TAACGATGTG
CTAACGCTCA CTGGCATGGT AGGAAAGCCC GATGGCTCTG AGCTTCTTTT TGCCTCAGCT
ACCGCGTCTA GAGAGAAAGC CAAAGACATG GGTATTGAGG TAGCTGAAGC CCTTTTAGAG
CAAGGTGCTG GCGAAATTTT GAAAGCACTT TATAGCTAA
 
Protein sequence
MSHLNTTRTV RIATRKSALA LWQAEYVKAK LLEHYPSMTV ELVPMSTQGD KILDTPLAKI 
GGKGLFIKEL EIAMLEGRAD IAVHSMKDVP VEFPEGFGLH AICERENPFD AFVSNNHDSL
DALPEGAIVG TSSLRRQCQI RKYRPDLIIK DLRGNVNTRL AKLDAGEYDA IILASAGLIR
LKMQSRIRMA LPADISLPAV GQGAVGIECR NDDEELIALL QALNHADTHT RVTAERAMNE
RLEGGCQVPI GSFATLDNDV LTLTGMVGKP DGSELLFASA TASREKAKDM GIEVAEALLE
QGAGEILKAL YS