Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00150 |
Symbol | hemC |
ID | 6775251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 160865 |
End bp | 161803 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642753578 |
Product | porphobilinogen deaminase |
Protein accession | YP_002124462 |
Protein GI | 196154973 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.413704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATC TCAACACCAC CCGCACCGTT CGAATTGCTA CTAGAAAAAG TGCCTTAGCG CTTTGGCAAG CAGAGTATGT GAAGGCAAAA TTGTTGGAGC ATTACCCATC AATGACCGTT GAGCTTGTGC CCATGAGCAC CCAAGGCGAT AAAATTCTCG ATACGCCGCT GGCCAAAATT GGCGGCAAAG GCCTTTTTAT CAAAGAGCTT GAAATTGCCA TGCTTGAAGG CCGTGCCGAT ATTGCTGTGC ACTCAATGAA AGACGTACCG GTAGAATTCC CGGAAGGCTT TGGGTTACAC GCTATATGTG AGCGTGAGAA TCCGTTCGAT GCCTTCGTGT CTAACAACCA CGACAGCCTA GATGCACTGC CAGAAGGCGC AATAGTGGGT ACATCTAGCC TACGCAGACA ATGTCAAATT CGCAAATACC GCCCTGATCT AATCATCAAG GACCTTCGCG GTAACGTAAA TACCCGTTTA GCTAAGCTTG ATGCAGGCGA ATACGACGCC ATTATTTTAG CCTCTGCAGG GCTTATTCGC CTTAAAATGC AATCGCGTAT TCGCATGGCT CTGCCTGCTG ACATCTCTCT TCCGGCTGTA GGCCAAGGCG CTGTAGGCAT TGAATGTCGC AACGACGATG AAGAACTAAT AGCGCTACTT CAAGCATTAA ACCACGCAGA TACGCACACC CGTGTTACTG CAGAACGCGC CATGAATGAA AGGCTAGAAG GCGGATGCCA AGTCCCTATT GGCAGTTTTG CTACACTGGA TAACGATGTG CTAACGCTCA CTGGCATGGT AGGAAAGCCC GATGGCTCTG AGCTTCTTTT TGCCTCAGCT ACCGCGTCTA GAGAGAAAGC CAAAGACATG GGTATTGAGG TAGCTGAAGC CCTTTTAGAG CAAGGTGCTG GCGAAATTTT GAAAGCACTT TATAGCTAA
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Protein sequence | MSHLNTTRTV RIATRKSALA LWQAEYVKAK LLEHYPSMTV ELVPMSTQGD KILDTPLAKI GGKGLFIKEL EIAMLEGRAD IAVHSMKDVP VEFPEGFGLH AICERENPFD AFVSNNHDSL DALPEGAIVG TSSLRRQCQI RKYRPDLIIK DLRGNVNTRL AKLDAGEYDA IILASAGLIR LKMQSRIRMA LPADISLPAV GQGAVGIECR NDDEELIALL QALNHADTHT RVTAERAMNE RLEGGCQVPI GSFATLDNDV LTLTGMVGKP DGSELLFASA TASREKAKDM GIEVAEALLE QGAGEILKAL YS
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