| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00093 |
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| Symbol | |
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| ID | 6778737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 94377 |
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| End bp | 96068 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753523 |
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| Product | MdlB protein |
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| Protein accession | YP_002124407 |
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| Protein GI | 196154918 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.302399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGTA GTACCCGAAG CGCGCCTGAC AACAAAGCTG TATCAGGCGC GCAGTTTTTA
AAAGAGCAAG TAGCCAGCCA ACGCTCCCTT TTGAATCAAT CAGTGTTTTT TGGTTCGATA
GGGTCAGTGC TTATGATAGT GCAGTGGCTG TTAGTTGCGC TTATTGCACA TGATACGCTT
GTAAACCAAT CCTCTCTTAG TGATTTGTCT GGCTATTGGC TGCTTCTTTT AGTTGTTAGT
GTTGTAAAAC CACTATTCAC ATGGAAGCAA ACTAACCTTG CACAAGACGC AAGTGCCAAT
GTAAGAAACC ATTTAAGGAA TACACTGCTT AAACAGTGGA ATGCCACCAG CCCTGTTGCA
CTACAAAGCC TATCTAATGG CGCCTTAGCG TCGCAATGGG TTGAAGATAT CGAATCTACT
GACGGCTATT TTTCTCGCTA TTGGCCTCAG CAAATGCTTG CTGTGATAAC CCCTCTACTC
ATTCTTGTTA CTGTTGCCTA TTTGAATTGG CTTTGCGCCA TTTTGCTCTT AGTATCCGCG
CCTCTCATTC CTCTTTTCAT GATTTTGGTT GGCATGGGCG CTGAGCATGT GAACGAAAAG
TATGCGTTGT TACGCCAACG TTTAGCCGGG CACTTTCTCG ACCGTGTCGC AAACCTTTCA
ACTATTGCGC TTTTAGGCGC GCAAAAAAAT ATGTCTGATG AGGTTGCTAA GCGTGGTGAC
ACTTATCGTA ACGTTGTTAT GAAAACACTT AAGCTAGCGT TTCTTTCTTC AACGGTACTG
GAGTTTTTCA CCAGCGTAGC CATTGCAAGC CTTGCTATTT ATATTGGTTT TTCACTTTAC
GGGGCAATTA ATTGGGGGCC TGCACAGTCG TTAACGCTGT TTTCAGGGCT TGGTATTTTA
CTGCTTGCAC CCGAATTTTT TAAGCCATTG CGCACGCTAT CGACTTACTA TCACGACAGA
GCCTGCGCTT TAGGCGCCGC CAATAATATA ATGTCTTCAC TGCAACACTT GGAAGAACAA
CAAGTGCTAT TAGGCTGCAG CGATGGCAGA CACGTTATAG CTTCAAGTGA TGTAACGCGC
TTGATGTTTA AAGACACCGT TATTGGGTAC AGCGGCAATA AACAGAAAAT GTCTGCCCTT
AACTTTTCGT TTTCCGGGCG AGGTTTACTG GTTTTTTCTG GCGAATCGGG GTGTGGTAAA
ACCACCCTTC TCAACACCAT TGCAGGTTAT TTACACCCAA TGTCGGGCAG TGTTGAACTA
GCACTTAAAG AAGTGCACTC CATTGCCTAT TTGCCTCAGA AAGCATGGAT TAAAAACGCT
ACCGTTCGAG AGAATTTATC CGTCACCGCC GCCTTCGCAT CAGATGAAGA TATGTTAAGG
GTTCTTGAAA GACTTGAATT GTCAGATGAG CTTCTAACAC ATCATAACGG GCTAGACACC
GTGATAGGTG AGCATGGGCA AGGGTTATCT GGAGGACAAA TGCAGCGTAT TGCGCTAGCG
AGAGTACTGT TAAACCCACC CGAACTTATT TTACTTGATG AGCCCACGGC AAGCTTAGAC
TTAAAAAGTA GGCTCGTAAT TACTGGCGTT TTAGACGAGC TTAAAAGCCG CGCCCTTGTA
GTGGTTGCAA CACATGACAG CGACCTTATA GCAAAAACCA GTAATCATTT TGACTTAACC
AATAAGGCCT AA
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| Protein sequence | MTSSTRSAPD NKAVSGAQFL KEQVASQRSL LNQSVFFGSI GSVLMIVQWL LVALIAHDTL
VNQSSLSDLS GYWLLLLVVS VVKPLFTWKQ TNLAQDASAN VRNHLRNTLL KQWNATSPVA
LQSLSNGALA SQWVEDIEST DGYFSRYWPQ QMLAVITPLL ILVTVAYLNW LCAILLLVSA
PLIPLFMILV GMGAEHVNEK YALLRQRLAG HFLDRVANLS TIALLGAQKN MSDEVAKRGD
TYRNVVMKTL KLAFLSSTVL EFFTSVAIAS LAIYIGFSLY GAINWGPAQS LTLFSGLGIL
LLAPEFFKPL RTLSTYYHDR ACALGAANNI MSSLQHLEEQ QVLLGCSDGR HVIASSDVTR
LMFKDTVIGY SGNKQKMSAL NFSFSGRGLL VFSGESGCGK TTLLNTIAGY LHPMSGSVEL
ALKEVHSIAY LPQKAWIKNA TVRENLSVTA AFASDEDMLR VLERLELSDE LLTHHNGLDT
VIGEHGQGLS GGQMQRIALA RVLLNPPELI LLDEPTASLD LKSRLVITGV LDELKSRALV
VVATHDSDLI AKTSNHFDLT NKA
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