| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00079 |
|---|
| Symbol | |
|---|
| ID | 6778291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 82701 |
|---|
| End bp | 83693 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642753509 |
|---|
| Product | Amidophosphoribosyl transferase |
|---|
| Protein accession | YP_002124393 |
|---|
| Protein GI | 196154904 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGCG CTATCTTAGA TGCTGGTGCA GATAGCTGGG GTAAAAGGCT TATTTTGTCA
CTGCACTCAA CTAAGCCTAA CAATGACCTA GAACTCGTTC TGGCTGGTTC TGGGATGGGT
GTTGGCGCAC TTACTTTTAG CTTATCTAGA AGTGCAAGTA AGCCAAAGAA GAATAAGAAT
ACGCTTGGCG ATATCCCTAT GCTTTTGCAG GGAAAGAGGG CAATTTTAAA AAATGAAGAC
ATTCCTAAGG AAGTCAAAAA AGCATTTGAA TACGGGTCCA GTATGGGTGG CGCCCGACCT
AAAACACTGG TTGAAGACAG TGGTATAAAT TACTTAGCGA AATTCAACCG TCCAGATGAT
TTATACAACG TATGTTTAGT AGAACATGCA ACAATGACAA TGCTAGAAGA ACTGGACGTT
AGAGTTGCAG CCACGTCTAT AGTGAACAGC CAACAAGAAG ACATATTATT AGTAGAGCGC
TTCGACTGTG ACGCTGATAG ACCAACACAC CATTTCTTAA GTGCTAATTC CCTAATCAAC
CAAGAAAAGT TGACGAATCA GGCATTAACT GAGAATTATA GTTATGGTGC TTTGACAGAG
TTTATAATGA AGCATGGAGC AGAGCCGAGA GATGCCCATG AACTGTACAC ACGCATGGTT
TTTAACATCT TAATGGGTAA CACTGATGAC CATTCCAGAA ATCATGCGTT CTTGTATTCC
TTCTCAGATA AAAACTGGCG CTTATCTCCA GCCTACGACG TATTGCCGAT AAACAATTCC
CGCCAACATG GAATTGGAAT AGGGGTTCAC GGCAGAGAAG GAACGCTTGA AAATGCGCTG
TCTCAATCTA AAAGGTTTGG ACTTTCTCAA GCAAAAGCCA AAACAATCAT TTCTAGTGTG
CAAGCGTTAA CTAATGAATG GATATCTTAT TTTACCAAGG CTGGTGTACC CGATACCGAT
ATAGAAACGC TTAAGGGGAT TATTCCTTTA TAG
|
|---|
| Protein sequence | MFGAILDAGA DSWGKRLILS LHSTKPNNDL ELVLAGSGMG VGALTFSLSR SASKPKKNKN
TLGDIPMLLQ GKRAILKNED IPKEVKKAFE YGSSMGGARP KTLVEDSGIN YLAKFNRPDD
LYNVCLVEHA TMTMLEELDV RVAATSIVNS QQEDILLVER FDCDADRPTH HFLSANSLIN
QEKLTNQALT ENYSYGALTE FIMKHGAEPR DAHELYTRMV FNILMGNTDD HSRNHAFLYS
FSDKNWRLSP AYDVLPINNS RQHGIGIGVH GREGTLENAL SQSKRFGLSQ AKAKTIISSV
QALTNEWISY FTKAGVPDTD IETLKGIIPL
|
|---|
| |