Gene MADE_00078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00078 
Symbol 
ID6777160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp81919 
End bp82326 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content51% 
IMG OID642753507 
Productcytochrome c5 
Protein accessionYP_002124392 
Protein GI196154903 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA AGACTTGGTT AACTGTTGCT GCTACTGCGC TAACTGTTTT TGCAGCACAA 
GCACAAGAAA TGAGTAACGA TGAAATTGCC GATCGCATTA AGCCGGTAGG TCAGGTACAC
GTTGCAGGCG CGGCGGCAGA AGGTAGTGCT GGCGCAGCTG GCGGAGCAAA GTCTGGTGAA
GACGTTTACA ACTCAGCATG TGTAGCTTGC CACGCAGCAG GCGTACTAGG CGCACCTAAG
CTTCAAAACG CTGCAGACTG GCAACCTCGT TTGGACGAGC GCGGCCTTGA TGGCGTTTGG
CAAAACGCAC TGAACGGTAT TAACGCTATG CCACCTCGTG GTACGTGCGG CACCTGTTCT
GATGACGAAA TTAAAGCGGC TATCGAGTAC ATGATTGAAG GTATTTAA
 
Protein sequence
MKLKTWLTVA ATALTVFAAQ AQEMSNDEIA DRIKPVGQVH VAGAAAEGSA GAAGGAKSGE 
DVYNSACVAC HAAGVLGAPK LQNAADWQPR LDERGLDGVW QNALNGINAM PPRGTCGTCS
DDEIKAAIEY MIEGI