| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00058 |
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| Symbol | |
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| ID | 6778926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 62531 |
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| End bp | 63340 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642753487 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_002124372 |
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| Protein GI | 196154883 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.170745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAT TACCCGAAGT TGAAGTAAGC CGTTTGGGCG TCTCACCACA TCTTATTGGC
AACACGATTA CCCGTGTTGT GGTTCGCGAG CGAAGAATGC GTTGGCCTAT TCCACAAGAG
GTGGCCAAGG TTGAGGGGCA AAAGGTCACG GCCGTAAAGC GCCGCGCTAA ATATCTATTG
ATTGAGACAG CGCAGGGTAC GCTAATTTTA CACTTGGGCA TGTCGGGTAA ACTACGGGTT
ATCGACGCTT CTACCCCAGT GATTAAGCAC GACCATGTGG ACATTGTGCT TAGCACGGGT
AAATGTCTGC GCTTTAACGA CCCTAGACGC TTCGGTGCCG TGCTGTATCA AGCGCCAGAT
ACACACATTC CCATGCTTGA TAATCTTGGG CCTGAGCCCC TTACAGACGA TTTTGACGAT
ACGCGCTTAT TTACCCTGTC ACGCAACCGC AAAGGCCCAG TGAAAAACTT CATTATGGAT
AATGCTATTG TGGTGGGGGT TGGAAATATC TATGCAAACG AAGCGCTATT TTTAGCGGGT
ATCGATCCAA GGCGTGCCGC CGGTAATATC AGTGCAGCCC GCTACAAGTC GTTAACCGCT
ACAATAAAGC AAGTGTTGGC AAAAGCCATT GAACAGGGCG GCACTACGTT AAAAGATTTT
GCGCAAACAG ATGGCAAGCC TGGCTATTTC GCCCAACACC TTAATGTCTA TGGCCGAAAA
GGAGAGCCAT GCGAGGCGTG TGGTAAGGCG ATAGAAAGCA AAGTAATCGG GCAGCGCAAT
ACCTTCTTTT GTACTCGCTG CCAACGTTAA
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| Protein sequence | MPELPEVEVS RLGVSPHLIG NTITRVVVRE RRMRWPIPQE VAKVEGQKVT AVKRRAKYLL
IETAQGTLIL HLGMSGKLRV IDASTPVIKH DHVDIVLSTG KCLRFNDPRR FGAVLYQAPD
THIPMLDNLG PEPLTDDFDD TRLFTLSRNR KGPVKNFIMD NAIVVGVGNI YANEALFLAG
IDPRRAAGNI SAARYKSLTA TIKQVLAKAI EQGGTTLKDF AQTDGKPGYF AQHLNVYGRK
GEPCEACGKA IESKVIGQRN TFFCTRCQR
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