Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00051 |
Symbol | |
ID | 6778425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 57530 |
End bp | 58219 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642753480 |
Product | putative lipoprotein |
Protein accession | YP_002124365 |
Protein GI | 196154876 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0750623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTAC ACATTCTATC GGCCATTCTA GGCTTTATTT GCCTTTCTCT TTCTGGGTGT TCCACTACAA CACTCGCCTA TTACAATACG CTCAAACTCG CTTTAAAAGA CAGAACCGTT ACTTATACTG TTGAAGAAAT TGCTGCCAGT AAAGCCGATC TTATGCAGAT AAAAGCCGGT GAGCGCGACG GAGCCTCTTT AGCTTTGGCG TACATCGACG GCGACAAATA CAAATGGGTA TCAGGTGATA AAGTTATCTT CACAATGCAC CACGGTATCA TCGTTAAAAC AGAAGGCTTA GACAACGACA TCTACTACAC CGGCAACTTA CAGCACAATC CACTGGCAAC GAATAATGTT TTGCCATTTA ACTGGAAGCG CAAGGTCGAT ATCGCAACTA TCGGTTATGG CATACCTGTA GACTCGTCAT GGCGAATTGA GGGTGAGGAA ACTCGCGAAT ACCTTGGGTA CTCTGTGCCT GTAATTAAGG TTGTTGAGCG CGTATCATTT TCAGAATACA CCCCTTTTAT CGACGTGGGG CTATCGTGGG AAAATACCTA CTTTTTGCAT AAGTACTCCA AAGAGTTGTT GGCCTCTAAG CAGCAATTTA GTCCAGAGGG AAACGTATAC GATATGGTCT ACCTAAGTCG AATTGTGCGT GAAATGAACA AGCAAGGAGC GACGCAATAA
|
Protein sequence | MKLHILSAIL GFICLSLSGC STTTLAYYNT LKLALKDRTV TYTVEEIAAS KADLMQIKAG ERDGASLALA YIDGDKYKWV SGDKVIFTMH HGIIVKTEGL DNDIYYTGNL QHNPLATNNV LPFNWKRKVD IATIGYGIPV DSSWRIEGEE TREYLGYSVP VIKVVERVSF SEYTPFIDVG LSWENTYFLH KYSKELLASK QQFSPEGNVY DMVYLSRIVR EMNKQGATQ
|
| |