Gene MADE_00040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00040 
Symbol 
ID6778117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp47579 
End bp48283 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content47% 
IMG OID642753469 
ProductRecA/RadA recombinase 
Protein accessionYP_002124354 
Protein GI196154865 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC CGCTATCTGT GCTTAACAAC CACCCGCATA TCTGGCGGGC CAGAGAAAAA 
AAGCAAAGTG AAGCAAAGTT TTCACTAGGC TTTCCGCATC TCGATAAAGC GCTTAACGGA
GGCGTTGCGT CTACTGGCCT TGTACGTATA GCTTCATTAA CGGGGGTCGG TGAACTTTCG
TTATTCAAAG AGGTTATCTG TAGGCACCGT ACGCATAAAC TTGTCGTGTT TATTAACCCA
CCAGGGCTGT TACAGTCACC TTGGTTAGAA AATTTAGGGT TAAACGCGCA GCAAGTGCTT
GTAGTAAAGG CAAGCTCACA GCAAGAGTCA TTATGGGCGG CAGAGCAATG TTTAAAAAGC
TCCGCCTGTC ATTGTGTAGT GTTATGGAGC AATGCCGTAG GTCAAAAAGC AGCGCGACGT
TTACAAGTAG CCGCAACACA TAACGATGCA TTGTGCTTAC TTTATACGCC ACAGCAACAG
CGTATATCAC AGCAAAATAC CAACGCTAGT GCTTTACCGA TTGCTTTAGA TCTCGCTTTG
TTAGGGGAGC CGCACACCTT ATCAATAAGC ATACGCAAGC AGCGCCATGG TTGGCCTAAA
GATAACATTG TTATATCCCA TCAGTGGACA CCTGACAATC GAGCGATCAA ATGGGCGATG
GCACACAATA CGCTTTCCGA TCAGGCGCTC CACTCTGTGA GTTAA
 
Protein sequence
MNKPLSVLNN HPHIWRAREK KQSEAKFSLG FPHLDKALNG GVASTGLVRI ASLTGVGELS 
LFKEVICRHR THKLVVFINP PGLLQSPWLE NLGLNAQQVL VVKASSQQES LWAAEQCLKS
SACHCVVLWS NAVGQKAARR LQVAATHNDA LCLLYTPQQQ RISQQNTNAS ALPIALDLAL
LGEPHTLSIS IRKQRHGWPK DNIVISHQWT PDNRAIKWAM AHNTLSDQAL HSVS