Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00040 |
Symbol | |
ID | 6778117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 47579 |
End bp | 48283 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753469 |
Product | RecA/RadA recombinase |
Protein accession | YP_002124354 |
Protein GI | 196154865 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.140421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAC CGCTATCTGT GCTTAACAAC CACCCGCATA TCTGGCGGGC CAGAGAAAAA AAGCAAAGTG AAGCAAAGTT TTCACTAGGC TTTCCGCATC TCGATAAAGC GCTTAACGGA GGCGTTGCGT CTACTGGCCT TGTACGTATA GCTTCATTAA CGGGGGTCGG TGAACTTTCG TTATTCAAAG AGGTTATCTG TAGGCACCGT ACGCATAAAC TTGTCGTGTT TATTAACCCA CCAGGGCTGT TACAGTCACC TTGGTTAGAA AATTTAGGGT TAAACGCGCA GCAAGTGCTT GTAGTAAAGG CAAGCTCACA GCAAGAGTCA TTATGGGCGG CAGAGCAATG TTTAAAAAGC TCCGCCTGTC ATTGTGTAGT GTTATGGAGC AATGCCGTAG GTCAAAAAGC AGCGCGACGT TTACAAGTAG CCGCAACACA TAACGATGCA TTGTGCTTAC TTTATACGCC ACAGCAACAG CGTATATCAC AGCAAAATAC CAACGCTAGT GCTTTACCGA TTGCTTTAGA TCTCGCTTTG TTAGGGGAGC CGCACACCTT ATCAATAAGC ATACGCAAGC AGCGCCATGG TTGGCCTAAA GATAACATTG TTATATCCCA TCAGTGGACA CCTGACAATC GAGCGATCAA ATGGGCGATG GCACACAATA CGCTTTCCGA TCAGGCGCTC CACTCTGTGA GTTAA
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Protein sequence | MNKPLSVLNN HPHIWRAREK KQSEAKFSLG FPHLDKALNG GVASTGLVRI ASLTGVGELS LFKEVICRHR THKLVVFINP PGLLQSPWLE NLGLNAQQVL VVKASSQQES LWAAEQCLKS SACHCVVLWS NAVGQKAARR LQVAATHNDA LCLLYTPQQQ RISQQNTNAS ALPIALDLAL LGEPHTLSIS IRKQRHGWPK DNIVISHQWT PDNRAIKWAM AHNTLSDQAL HSVS
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