| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00038 |
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| Symbol | |
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| ID | 6776386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 43004 |
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| End bp | 45964 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753467 |
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| Product | putative DNA polymerase III alpha chain |
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| Protein accession | YP_002124352 |
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| Protein GI | 196154863 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAG TGGTACGCGC TTTCGATGAA ATTACACACC AAGGGTTGCC CATTAAGCTT
ATCGTAGGCA GCTATTTCAT ATTTGATAAG ACATTATCTT TTGTATTGCT GTGCCCAAAC
AAAGCGGCCT ACAGCGAACT GTGCCGTATT ATCACTAACG CCAGAAGACG CTCTGAAAAA
GGGGAGTATC AGCTTGCCGA GTGGGACTTA CGCACCATTC GCCACTGTAA ATTCATCTGG
CTGCCTAGCG GTGAGGTGAA TGAGGATAAG TATTGGGCAC AGTGGCTACA GAAACACCCC
AATATAGACG CCTTTATCGG CGCGCAACGC CTGCTAGACG GGCGTGACCA TCATAGGTTT
GCGCATTATA ATCACTTACA GTCTACCTAC GCTTTTCCTG TCATCGCCTG TACTGGTGCA
TTAATGCATC ATGCAGATAG ACTACCGTTA CAGCATATTT TGCACACCAC CAAAGTGCAC
ACCACCGTAC ACGAGATAGG AAGAGAAGCG CTAAGCAATG CAGAGCGTAG TTTGCGTACA
ACCCATAAAA TAAAAAAGCT TTATCCTGAA AAGTGGCTGG CTAATACCCA TAGCCTTGCC
CAACAATTTA CCTTCTCTTT AGAAGAGTTG CGCTACCAAT ACCCTGCTGA ACTTGTGCCT
GAAGGCTATA CACCCACCTC ATATTTAAGA GAGCGCGTGG AAGAAGGCAT TAAGATTCGC
TTCCCTGAAG GCATTACGTC AGAGATAAGG CAAACAATAG AAAAAGAACT CAGGCTGATT
GCTGAGCAAG AGTATGAGTA CTTCTTTTTA ACGATTTACG ACATTGTTCA ATTTGCCAAA
CAGCAGCGCA TTTTATACCA AGGCCGAGGC TCAGCCGCTA ATTCGGTGGT TTGCTATTGT
TTAGAAATAA CCGCTGTCGA CCCAAGGCAA ATTAGCGTGC TGTTTGAGCG GTTTATTTCC
AAAGAGCGTA ATGAACCGCC AGACATTGAT GTAGATTTTG AGCATCAACG CCGAGAAGAA
ATTATTCAAT ACATCTATAA AAAATATGGC AGAGAAAGAA CTGCAATTGC AGCTACCGTT
ATCTGCTATC GCTTTAAATC AGCGTTTAAA GATGTAGGGA AGGCCCTTGG ATTTAGCGAG
TCTCAGCTAG ACTTTGTGGT TAAACAAATA AACCGACGGG ACAGCGTTAT TCCTTGGAAG
TCCCAATTGG CAGACCTTGG GTTAAACCCT GAAGAAAAAC GTGTACAGCA GCTAATTAGC
TTAACTGAAG CGCTATTAGG AACGCCCCGA CATTTATCGC AGCACGTAGG CGGCTTTGTA
ATTAGTGCTG GGCCCCTGTA TGACCTAGTT CCTGTAGAGA ATGCAGCAAT GGAAGCGCGC
ACTATTATTC AATGGGATAA AGACGATATA GAAACCCTTG GCTTATTAAA AGTGGATGTT
CTGGCCCTTG GCATGTTAAG CGCCATTCGG CGCGCATTCT CCTTAATCAA TAAGCAATAC
CCCGTCGAGA CAAGCATTCC TTTTATCACC AAGCTTGGTG ATGACAAGCA AGTATTCGAC
ATGATATGTC GCGCTGATAC CGTTGGGGTT TTCCAAATAG AATCGCGGGC ACAAATGTCT
ATGCTTCCGC GGCTTAAACC CCGCCGTTAT TACGACTTGG TAGTGCAAAT AGCTATCGTA
CGACCAGGCC CAATTCAGGG GGATATGGTA CATCCTTATT TAATACGCCG GCACGGCAAT
GAAACTATTA GCTACCCATC AAAAGAAGTT GAAAAAGTTC TGTCGCGCAC CATGGGAGTA
CCTATATTTC AAGAGCAAGT TATACAGCTA GCCATGGTAG CCGCAGGGTT TAGCGGAGGG
GAAGCCGATC AGCTACGCCG CGCAATGGCG AGCTGGAAAA AAGATGGCAG AATTTTCGAG
TTTAGAGACA AGTTAATTAA AGGAATGACG AATAAAGGCT ACGACAGTAC GTTTGCACAT
AACTTGTTTG AACAAATTAA AGGGTTTGCA GGTTATGGTT TTCCAGAATC TCACTCAGCG
TCTTTCGCAG TATTAGCGTA TGTGTCTTGC TGGCTAAAGT TTTACTTTCC CGTGGAATTT
TACGTAGCGT TATTAAACAG CTGGCCAATG GGTTTTTATA CGCCGTCACA GTTAGTTCAA
GATGCGAAGC GACACAATAT TTATGTAGAA GCCCCCTGTG TAAACAAGTC AGACACTGAG
CACACTTTAG TTACCAAGGG TGAAGATAAA TATATTCAAT TAGGGCTTAA GCTGATTAAA
GGGTTAAGTG AAGTAGCGTC ACACAAGATT GTGAAAAACC GCCCGGCAGC AGGCTATACC
CATATAGAGC AAATTCAGCA TTTATCGATT AAAAGTAACG AGCTAGAGGC GCTAGCGAGC
GCCGATGCGT TTCGCACTAT TTCCGGCAAC CGCTACGAAA CACGCTGGCG AATAATGGAC
ACGCAAACAC GCCTGCCGCT TTTCGACACT GTAGAGGTGA ATACTAAACA AGGCTATTCG
CCTTTAAAAA ATAAACCATC AGATGCGCAA AATTTACTCG AAGACTATGC ATCGACAGGT
TTGTCAGTTA ACAACCATCC TATTTCGCTG CTTAAACGCC AGCATAAACT CAATGATATC
AGCTGGTCTA ACACGCTTAT TAACAAGAAG AATAAGTCGG TAGTTAAAGT GCTAGGTGCC
GTGACCGGAC GTCAAGCCCC TGGTACAGCC GCAGGCGTTA CCTTTCTTAC ATTAGAGGAC
GACATTGGCA ATATAAACGT GGTTGTCTGG CAAGCCACAG CACGCGCTCA GCAAAAGACT
TTCTTAAAAG CAAAGCTTCT GCAAGTTAAC GGTATTATTG AACGCTCTAA AGAGGGGGTA
ATTCATATTA TTGCCGGCAA ACTTATCGAT AGAACACCCT GGCTGGAAAG TATTTCGCTC
AATTCGCGAG ACTTTCATTA G
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| Protein sequence | MAGVVRAFDE ITHQGLPIKL IVGSYFIFDK TLSFVLLCPN KAAYSELCRI ITNARRRSEK
GEYQLAEWDL RTIRHCKFIW LPSGEVNEDK YWAQWLQKHP NIDAFIGAQR LLDGRDHHRF
AHYNHLQSTY AFPVIACTGA LMHHADRLPL QHILHTTKVH TTVHEIGREA LSNAERSLRT
THKIKKLYPE KWLANTHSLA QQFTFSLEEL RYQYPAELVP EGYTPTSYLR ERVEEGIKIR
FPEGITSEIR QTIEKELRLI AEQEYEYFFL TIYDIVQFAK QQRILYQGRG SAANSVVCYC
LEITAVDPRQ ISVLFERFIS KERNEPPDID VDFEHQRREE IIQYIYKKYG RERTAIAATV
ICYRFKSAFK DVGKALGFSE SQLDFVVKQI NRRDSVIPWK SQLADLGLNP EEKRVQQLIS
LTEALLGTPR HLSQHVGGFV ISAGPLYDLV PVENAAMEAR TIIQWDKDDI ETLGLLKVDV
LALGMLSAIR RAFSLINKQY PVETSIPFIT KLGDDKQVFD MICRADTVGV FQIESRAQMS
MLPRLKPRRY YDLVVQIAIV RPGPIQGDMV HPYLIRRHGN ETISYPSKEV EKVLSRTMGV
PIFQEQVIQL AMVAAGFSGG EADQLRRAMA SWKKDGRIFE FRDKLIKGMT NKGYDSTFAH
NLFEQIKGFA GYGFPESHSA SFAVLAYVSC WLKFYFPVEF YVALLNSWPM GFYTPSQLVQ
DAKRHNIYVE APCVNKSDTE HTLVTKGEDK YIQLGLKLIK GLSEVASHKI VKNRPAAGYT
HIEQIQHLSI KSNELEALAS ADAFRTISGN RYETRWRIMD TQTRLPLFDT VEVNTKQGYS
PLKNKPSDAQ NLLEDYASTG LSVNNHPISL LKRQHKLNDI SWSNTLINKK NKSVVKVLGA
VTGRQAPGTA AGVTFLTLED DIGNINVVVW QATARAQQKT FLKAKLLQVN GIIERSKEGV
IHIIAGKLID RTPWLESISL NSRDFH
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