| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00027 |
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| Symbol | |
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| ID | 6775489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 29097 |
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| End bp | 29702 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753452 |
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| Product | putative double-stranded RNA-binding protein with unique protein fold, with YrdC/RibB domain |
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| Protein accession | YP_002124341 |
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| Protein GI | 196154852 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA CTCAAAATGG GAACGTAAAT ACGTTTACCC CCGTTGAGGC TAATGCATCT
GAAGTCGACC CTGTTGTTGC CGCTTTCGAA GCGGGGCGTT TAATTGTTTA TCCGACCGAA
GCGGTAATGG GTATAGGATG TGACCCTGAC AACGAAGCAG CGGTTAATGC ACTATTAGAT
ATCAAACAAA GGCCTGTTGA AAAAGGCGTA ATATTAATTG CCGCTAATTA CAGCCAGCTT
TTGCCCTACG TAGATGACAA TGCAATTCGT CCCGATAGAC GTACCGATAT TTTTTCAAGC
TGGCCTGGCC CTAACACCTG GCTATTACCT AAGTCGTCAT CGGCGCCTGT TTGGTTAACC
GGCAAACATA GTAAAATAGC GGTGCGCGTA ACTAATCATC CTGTGGTTGT AGCGCTGTGC
AATAAGTTGG GTAAGCCACT TGTTTCAACC AGCGCTAACC TAACAGGGCA ACCGCCAGCG
ACAGACACCG ACGAAGCCAA AGCCGTGTTT GCAGATTCTG TATTTTATGT AGAAGGTAAA
GTAGGCGGAG CAACTAAACC CAGTACCATT CGCGATGGTG ACACAGCAGA GGTAATAAGA
GCATGA
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| Protein sequence | MSDTQNGNVN TFTPVEANAS EVDPVVAAFE AGRLIVYPTE AVMGIGCDPD NEAAVNALLD
IKQRPVEKGV ILIAANYSQL LPYVDDNAIR PDRRTDIFSS WPGPNTWLLP KSSSAPVWLT
GKHSKIAVRV TNHPVVVALC NKLGKPLVST SANLTGQPPA TDTDEAKAVF ADSVFYVEGK
VGGATKPSTI RDGDTAEVIR A
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