| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00023 |
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| Symbol | |
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| ID | 6775861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 25707 |
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| End bp | 26810 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642753448 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002124337 |
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| Protein GI | 196154848 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.574097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTGA ATAATTTGAA GGTGGTTAAT TTGAAAAAGC GATTAATAAG CGCTCGTCGC
GGGGCAACAC TCCTTCTTTG TGCAATTCTG TCTTTGCCAG CGTTTGCACT TCAACTCAAA
GATACCGCAC CTGAAACCTA CACGGTAAAA CGTGGTGATA CGCTCTGGGC CATTGCTAAC
ATTTTTTTGA ATGAACCTTG GTTATGGCCA GAGCTTTGGC GCACTAACAC ACAAATTGAA
AATCCTCACT TGATTTATCC TGGTGATGTC ATCGTTGTAG GCTACATAGA CGGACAGCCT
GTTTTATCGG TAAAACGAGA TAAACCTAGC TACAAACTGT CACCTTCAAC GGACAAACGG
TTAAAACCAA AGCCTGTAGA CGTACTTTCT TGGACAACCA TATCGCCGTT TATTAAACAA
CATATGTTAC TAGACGAAGA GAGTTATCAG GCATTACCGA AACTGTTAGG GAACCAAGAC
GGAAACGTAA GGTTTGCTGC AGATGACTTT GTACTAAGTC AACAGCAATT CAGTACTGAC
GACCAGTATA GAGTCATTAG AAAGCACGCT ACTATTAAAA ACCTTGATGG AGAAATATTG
GGCGTACAAG TTACCCATGT TTCCACGGCA TCTTTAGTAG AAAAAGGTCA GGCAGACGAC
ACCATGCTGC TTTTTATTGA TGATGCGAAT CAAGAGGCTA AACGCGGCGA TAAGCTAATG
GCTGGTGGGT TTAAACAGCC GCAAAGCTTT GAACTTGTTC CTGCGAAGTC TCAGCGTGGG
GCCGTTGTGG GAGACCTACA CGATCACGAC CTGTTAGGAA AGTATGACGT TGTTATCCTT
GATTTGGGCG CGGCAGATGT CTTACCGGGA ACAGTGTTAG GTGTTTACGC ACAAGGTCCA
GCCATCATAG ATGAAGAAAG TCCGCGTTAT GTAGATGAAC CGGGCATAAA AACAAGTGGT
GAATGGTTTA TCGATACAGT GTCGCAACCC GCACTTAAAG TTGGTGAAGT TGTGGTATTC
AAAACATTTG ACGCGGCAAG TTACGGATTA ATCACACGAG CGAACAAAGG CATTAAGCGC
GGCTTTATTG TCGCTAAACC TTAA
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| Protein sequence | MIVNNLKVVN LKKRLISARR GATLLLCAIL SLPAFALQLK DTAPETYTVK RGDTLWAIAN
IFLNEPWLWP ELWRTNTQIE NPHLIYPGDV IVVGYIDGQP VLSVKRDKPS YKLSPSTDKR
LKPKPVDVLS WTTISPFIKQ HMLLDEESYQ ALPKLLGNQD GNVRFAADDF VLSQQQFSTD
DQYRVIRKHA TIKNLDGEIL GVQVTHVSTA SLVEKGQADD TMLLFIDDAN QEAKRGDKLM
AGGFKQPQSF ELVPAKSQRG AVVGDLHDHD LLGKYDVVIL DLGAADVLPG TVLGVYAQGP
AIIDEESPRY VDEPGIKTSG EWFIDTVSQP ALKVGEVVVF KTFDAASYGL ITRANKGIKR
GFIVAKP
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