| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00022 |
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| Symbol | def |
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| ID | 6775476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 25011 |
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| End bp | 25520 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753447 |
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| Product | peptide deformylase |
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| Protein accession | YP_002124336 |
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| Protein GI | 196154847 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATTT TAGACGTATT AAGTTTTCCT GATGAACGTC TTCGTACGGT AGCTAAGCCG
GTAGAAGAAG TTAACGACGA AATTAAACAA TTGGTATCGG ATATGTTCGA AACCATGAAA
GACGAGAACG GCATCGGCCT TGCGGCGACG CAGGTGAACC GTCATGTTCA AGTTGTTGTA
ATGGACGTAT CGGAAGATCA AAACGAGCCA CGTGTATTTA TTAACCCAGA AATTACTCGC
AAAGATGGCT CAACGATTAG TGAAGAAGGC TGTTTATCTG TTCCGGGTAA TTACGCCAAA
GTTGAGCGAG CAGAAGCGAT TACGGTTAAA GCGTTAGATC AAAATGGCGA GGCATTCGAG
CTAGACGCAG AAGGCCTACT TGCGATTTGT ATTCAGCACG AGCTTGATCA CTTAAAAGGT
AAGCTGTTCA TTGACTACCT TTCTCCGCTT AAGCGCCAAC GTATTCGTAA GAAGCTTGAG
AAAGAAGCGC GTCTTGCTGC GAAAGCCTAA
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| Protein sequence | MAILDVLSFP DERLRTVAKP VEEVNDEIKQ LVSDMFETMK DENGIGLAAT QVNRHVQVVV
MDVSEDQNEP RVFINPEITR KDGSTISEEG CLSVPGNYAK VERAEAITVK ALDQNGEAFE
LDAEGLLAIC IQHELDHLKG KLFIDYLSPL KRQRIRKKLE KEARLAAKA
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