| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00016 |
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| Symbol | |
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| ID | 6775456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 15632 |
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| End bp | 18424 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753441 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002124330 |
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| Protein GI | 196154841 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATT CTAAAAAGCC GCCATTTATT CTTGTTGATG GATCGTCTTA TCTCTTTCGT
GCTTTTCACG GTCTACCACC TTTAACCAAC TCAAAAGGTC AAGACACCGG CGCTATTTAC
GGCGTTGTAA ATATGCTCAA GAGCCTGATC AAACAATATA ACCCAACTCA CATGGCGGTT
ATTTTTGACG CTAAAGGCAA AACCTTTCGC GACGATATTT ATAAAGAATA TAAAGCTAAC
CGCCCGCCAA TGCCGGAAGA GCTAAGAAGT CAGATCGAGC CCTTACACAC GATTATCAAA
GCGATGGGTC TACCGGTTAT TGTTGAGTCG GGTGTGGAAG CTGATGATGT TATTGGTACA
TTAGCAAAGC ACGCCACAGA AAAAGGGATC GATACACTTA TCAGTACGGG CGACAAAGAT
ATGGCTCAAC TGGTGAACAA GCATGTCACA CTAATCAATA CCATGACTAA CCAGCTTATG
GATGTGGAAG GTGTAAATAC TAAATTCGGT ATCCCTCCTG AACTTGTGAT CGACTTTCTC
GCGCTTAAAG GCGACAAGGT TGATAACATC CCAGGCGTGC CAGGGGTTGG TGATAAAAGC
GCTCAAGCAC TATTAAACGG TATCGGCGGT ATTGACGAGA TATATAAGAA TTTAGACAAG
ATCGCCGACC TTTCATTTAG AGGCAGTAAG TCGATGGCTG CTAAAATGGA AGAGTATGAA
GAACAGGCCC GCCTTTCTTA CACCCTCGCC ACGATTAGTA TCGATCTGGA ATTGGACTAC
GATGTCGAAA CGCTAATGCC TTGCCAAGCC GACAATGAAC AACTTCGCGA TCTATTTGCC
GAATACGAGT TTAAGCGTTG GCACGCTGAA GTGAGTGCTT TGTTAGCAGG CGGCGATACA
TCTAGTGCTA CAGAATCCAC AAGCGCTGAA AGCAGCGACT CTACGCAAAC GAGTGAATCT
GCGACATCTG GCGATATTGA TAAGTCTAAG TATGAGACCG TGCTAGATGA AGAAACATTT
AATACTTGGC TTGGCAAATT GCAAAAAGCA CAGCTCATTG CGTTTGATAC TGAAACGACC
AGCCTTAATT ATATGGATGC AGAGCTTGTT GGCGTCTCAT TTTGTATTGA AGAAGGTGAG
GCTGCCTATG TACCTGTAGC GCATGATTAC CCAGATGCTC CGACACAGTT ATCTCGCGAG
TTTGTATTAG ATGCACTTAA GCCTATTTTA GAATCGAGCA ATATCATTAA AGTAGGTCAG
CATATCAAAT ACGATAAAAA CGTATTGGCA AACTACGATA TTACGTTGAA CGGTATTGGC
TTTGACACCA TGCTTGAGAG TTATGTGCTT AACAGCACTG CACAACGTCA CGACATGGAC
TCCCTTGCTC TTGCCTATCT CGGCCACAAA ACCATTCACT TTGAAGACAT TGCCGGTAAA
GGGGCGAAGC AACTTACGTT TAACCAAATT GCTCTTGAGG AAGCTGGGCC GTATGCTGCT
GAAGATGCGG ATATTACGCT TCGCTTGCAC AATACAATAT GGGCTAAGCT GAAAGAAATT
CCAGAGCTTA AGAACTTGTT AATTGATGTA GAAGTGCCCC TTGCTTGCGT ACTGTCGCGA
ATGGAGCAAG AAGGGGTATT AATTGATAGT CAAAGATTGA GTCAGCAAAG CCAAGATCTT
GCCGCCCGTA TCGCTGAGCT GGAAAAAGAA GTCCATGAAG AAGCCGGCGA ACCATTTAAC
CTTGGTTCAA CAAAGCAGCT TCAACATATT CTATTTGAAA AGATGTCGCT GCCCATAATA
AAGAAAACGC CTAAAGGCGC GCCATCAACG TCTGAAGACG TGCTACAGGA GCTTGCCCTT
GAATACCCGC TTCCCAAGAA AATTATGGAA TACCGGGGAT TAACCAAGTT GAAAAATACC
TACACCGATA AGCTTCCAAA GATGATCAAT CATCGAACAG GCCGTGTCCA CACATCTTAC
CATCAGGCCA TAACAGCGAC CGGAAGACTC TCTTCTACCG ATCCGAATTT ACAAAACATC
CCTATTCGCA ACGAAGAAGG CCGTCGTGTA CGCCAAGCCT TTGTTCCCCG TAAAGGAAAC
AAGTTTGTTG CTGCCGATTA CTCGCAAATT GAACTGCGCA TTATGGCTCA TCTGTCAGGG
GATAAAGGTC TGTTAGATGC GTTTGCACAT GGCAAAGATA TACATAAAGC CACCGCATCA
GAGGTATTTG GGGTGCCGCT TGACGAAGTA ACAACCGAAC AGCGACGTAG CGCTAAGGCC
ATTAACTTTG GCCTTATTTA CGGCATGAGT GCATTTGGGT TGGCTAAGCA ATTAAATATT
CCCCGTAATG AAGCCCAGAA ATACATGGAT CTTTACTTCG AACGTTACCC TGGTGTACTT
GAATATATGG ACTCAACCCG CGAGAGTGCA AAAGAAAAAG GCTATGTTGA AACGGTATTT
GGCCGACGTC TTTACCTGCC AGATATTAAA GCAAGCAATG GTGCCCGTAG AAAAGGCGCA
GAACGCGCCG CTATCAATGC GCCTATGCAG GGTACAGCCG CAGACATCAT TAAAATGGCT
ATGATCAAAG TGGATGACTG GATTTCAAAG AATGCCGCAG ACGATGTCAC TATGATGATG
CAAGTGCACG ATGAGTTAGT GTTCGAAATA AAAGAAGATA AAGTCGATAG CTATGTGAAG
ACCATCAACA CGCTTATGGA AAGCGCTGCA ACGCTTAATG TACCGCTTGT TGTTGAAGCG
GGTGTTGGTG AAAACTGGGA CGAAGCGCAC TAG
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| Protein sequence | MPDSKKPPFI LVDGSSYLFR AFHGLPPLTN SKGQDTGAIY GVVNMLKSLI KQYNPTHMAV
IFDAKGKTFR DDIYKEYKAN RPPMPEELRS QIEPLHTIIK AMGLPVIVES GVEADDVIGT
LAKHATEKGI DTLISTGDKD MAQLVNKHVT LINTMTNQLM DVEGVNTKFG IPPELVIDFL
ALKGDKVDNI PGVPGVGDKS AQALLNGIGG IDEIYKNLDK IADLSFRGSK SMAAKMEEYE
EQARLSYTLA TISIDLELDY DVETLMPCQA DNEQLRDLFA EYEFKRWHAE VSALLAGGDT
SSATESTSAE SSDSTQTSES ATSGDIDKSK YETVLDEETF NTWLGKLQKA QLIAFDTETT
SLNYMDAELV GVSFCIEEGE AAYVPVAHDY PDAPTQLSRE FVLDALKPIL ESSNIIKVGQ
HIKYDKNVLA NYDITLNGIG FDTMLESYVL NSTAQRHDMD SLALAYLGHK TIHFEDIAGK
GAKQLTFNQI ALEEAGPYAA EDADITLRLH NTIWAKLKEI PELKNLLIDV EVPLACVLSR
MEQEGVLIDS QRLSQQSQDL AARIAELEKE VHEEAGEPFN LGSTKQLQHI LFEKMSLPII
KKTPKGAPST SEDVLQELAL EYPLPKKIME YRGLTKLKNT YTDKLPKMIN HRTGRVHTSY
HQAITATGRL SSTDPNLQNI PIRNEEGRRV RQAFVPRKGN KFVAADYSQI ELRIMAHLSG
DKGLLDAFAH GKDIHKATAS EVFGVPLDEV TTEQRRSAKA INFGLIYGMS AFGLAKQLNI
PRNEAQKYMD LYFERYPGVL EYMDSTRESA KEKGYVETVF GRRLYLPDIK ASNGARRKGA
ERAAINAPMQ GTAADIIKMA MIKVDDWISK NAADDVTMMM QVHDELVFEI KEDKVDSYVK
TINTLMESAA TLNVPLVVEA GVGENWDEAH
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