Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1571 |
Symbol | |
ID | 6744402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 1485462 |
End bp | 1486034 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642751391 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_002122231 |
Protein GI | 195953941 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTTG AGTTTATAAG AACAGATATA AAAGAGGTGA TACTGATAAA GCCAAAGGTC TTTAAAGACG AAAGAGGGTT TTTCTTAGAA AGCTATAAAA AATCTGAGTT TGAGAAAAAC GGCATAACAG ATATCTTTAT CCAAGATAAT CATTCAAAAT CTGTAAAAGG AGTACTGAGG GGCCTTCATT ATCAAAAAGA ACCAGCAGCC CAAGGAAAAC TTATAAGGTG TATAAAGGGT AAAATATTTG ATGTGGCTGT AGATATAAGA AAAAATAGCC CCACTTACGG CGGATGGGTA GGGTATGAGC TCTCAGAAGA AAATAAACTG ATGCTTTTTA TACCAAAGGG CTTTGCCCAT GGGTTTTTGA CCCTTTCAGA AGAAGCTGAG ATCATATACA AAGTATCTGA GGCCGAGTAT TCAAAAGAAC ACGACAAAGG TATAATATGG AACGATAAAA CCATAAGCAT AAAATGGCCT TTAGAACATA TAAAAGAGAT TATTTTATCT GATAAAGATA AAAATCTACC AACACTAGAA CAAGCAGACA ACAACTTTTT ATACGGAGGA TAA
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Protein sequence | MPFEFIRTDI KEVILIKPKV FKDERGFFLE SYKKSEFEKN GITDIFIQDN HSKSVKGVLR GLHYQKEPAA QGKLIRCIKG KIFDVAVDIR KNSPTYGGWV GYELSEENKL MLFIPKGFAH GFLTLSEEAE IIYKVSEAEY SKEHDKGIIW NDKTISIKWP LEHIKEIILS DKDKNLPTLE QADNNFLYGG
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