Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1510 |
Symbol | |
ID | 6744341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 1423510 |
End bp | 1424712 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642751331 |
Product | Ornithine decarboxylase |
Protein accession | YP_002122171 |
Protein GI | 195953881 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000015857 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGAAA AAGTTTTGGA AGCTGAAGAG GTGCCGGATG TATATCCTTT GCAGTATAAG TTTGCGAAGC AGTATTTTGA TAGCATAGTA TTAAGAAAAC CCTTTATATT GGATGTTCTT AAAAACGTAA AAACCCCGAC TCTAGTCATA AACTTAGACA GAATAAAAGA GAGGTTTATA GAACTACAAG AGGCTTTAAA AGAAGCAAAG ATATATTATG CGGTAAAAGC AAACGATCAT CAAGAAATAT TGGCTTTGCT AAATGACCTT GGCAGTGGTT ATGAAGTGGC TTCTTCCTGG GAACTGGAAA AAGTCTTAAG ACTTGGAGTA GATGGTTCAA GAATTATATC TAGCAACCCG GTAAAACCAT TAGATTTTAT AGATTACGCT TATAAATCTG GTATTAAAGC TTTTAGCATA GATTCATACA AAGAAATAGA TAAGTTAAAA AAGATAGCTC CAAGATCAAG AGTATACATA AGGCTAATAG TACCAAACGA AGGAAGCGAT TGGCCTCTTA CCAACAAATT TGGCGTTGAT GTAGATACCG CTTTAGATAT TCTTGAGTAT GCAAAATACC AAGGATTTGT ACCTTATGGT ATAACATTTC ATGTAGGTTC CCAGTGCAAC AACCTAAGAA ATTGGTTTAT AGGTATAAAA AAAGCTTGGG AGCTTTGGGA AAAAGCCATA TACAAAGATA TAAAACTTAC AATGCTAAAT TTAGGGGGTG GTATCCCCGT AAACTATCAA TACGAATCCC TTAGTATAAG AGATATTGGT TCTTACATAG AGGCGCTTTT GCAAAAGTAT TTCCTTATAA AGCCTATGGA AGTACAAATA GAACCAGGAA GAGGACTTGT AGGAGATGCT GGAGTGTTGG TTAGCTCTGT GATAGGCAAA ACCACAAAAT ATATAAACGG TGAAGAATCT TACTGGATTT ACTTAGATAC TGGGGTATTT AACGGGCTTG CTGAAGTTTT AGGGGGCATA AGCTATCCTA TGTATGCTGA GCAAAAAGGC GAGATAAAAC CATACACCAT AGCTGGGGTT AGTTGCGACA GCATGGATAT AATATCAAAT TTCACATATC TTCCAGAGGT GGACATAGGC GATAGAGTGT ATATAATGGC AACGGGTGCT TACACTACAG TTTACGCTGC CAATTTCAAC GGCTTTGGCA TACCGGAAAC TGTTTTTGTA TAA
|
Protein sequence | MPEKVLEAEE VPDVYPLQYK FAKQYFDSIV LRKPFILDVL KNVKTPTLVI NLDRIKERFI ELQEALKEAK IYYAVKANDH QEILALLNDL GSGYEVASSW ELEKVLRLGV DGSRIISSNP VKPLDFIDYA YKSGIKAFSI DSYKEIDKLK KIAPRSRVYI RLIVPNEGSD WPLTNKFGVD VDTALDILEY AKYQGFVPYG ITFHVGSQCN NLRNWFIGIK KAWELWEKAI YKDIKLTMLN LGGGIPVNYQ YESLSIRDIG SYIEALLQKY FLIKPMEVQI EPGRGLVGDA GVLVSSVIGK TTKYINGEES YWIYLDTGVF NGLAEVLGGI SYPMYAEQKG EIKPYTIAGV SCDSMDIISN FTYLPEVDIG DRVYIMATGA YTTVYAANFN GFGIPETVFV
|
| |