| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1287 |
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| Symbol | ispD |
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| ID | 6744106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1199557 |
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| End bp | 1200195 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642751098 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002121950 |
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| Protein GI | 195953660 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTTCTT TAATACTTTT AGCGGCTGGG CTTGGCAAAA GAGCCGGTAT AAAAAAACAG
TTTATAAAGT TTAGAGATAT GCCGCTATAC AATTTCACTT TAAGAAAAGT GGCCGATCTT
TTCAACGAGA TAATCATGAC GGTGCCCCAG GATGTGGAAC CTTATATTTT ATACGATGCT
CATAAGTTTG GAGCAAAGTT TGTGTATGGT GGTGCAGAAA GACAAGATTC TGTAAGGCTT
GCATTGGAAG TGGCAAAAGA GGATATAGTA GTAATACACG ATAGCGCAAG GCCCTTTGCT
AGCCGAGAAG TATTTAAAAA GGTGATGGAG CTTGAAAACT ACGACGGGAA AATAGCAGCG
GCAAAAGCAA GAGATACTAT AAAAAAGTTA GAAAACGGTA TTTTAAGAAC TATTCAAAGG
GATAACGTGT GGCTGGCTCA AACACCCCAA TGTTTTAAAA CAGATGTTAT AAAACTTTGT
CATGAAAAAG CCTTAGAAGA TGGTATAAAA GCCACAGACG ATGCTTACTT ATTGGAATAT
TATGGATACA GTGTAGGTAT AGTAGAATCC TCTTATTGGA ATATAAAACT CACCTATCCT
GAGGATATTC CGTTTTTTGA TAAACTATTG CAAAGATAA
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| Protein sequence | MPSLILLAAG LGKRAGIKKQ FIKFRDMPLY NFTLRKVADL FNEIIMTVPQ DVEPYILYDA
HKFGAKFVYG GAERQDSVRL ALEVAKEDIV VIHDSARPFA SREVFKKVME LENYDGKIAA
AKARDTIKKL ENGILRTIQR DNVWLAQTPQ CFKTDVIKLC HEKALEDGIK ATDDAYLLEY
YGYSVGIVES SYWNIKLTYP EDIPFFDKLL QR
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