Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1123 |
Symbol | |
ID | 6743939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 1041346 |
End bp | 1042014 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642750932 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_002121787 |
Protein GI | 195953497 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC CTTACATTAT AGGAGGAACA ATATTATTAG TTTTAATTGG TGGTTTTGTT TTTAACAGAT ACGTGTATAG TAAAATAGAA TATAAAAAAG GTCTTTCTTA TTATAAAAAT AAAAACTACC AAAAAGCATT ACCTTTATTT AAATACGCTG CGAATCAAGG ATATGCGCCA GCAGAAGAGA AGCTTGGATA TATGTATGGA CGCGGTCGGG GTGTACCACA GGATTACTAT GAAGCTGTAC ATTGGTTTAA AAAATCTGCT AAACAAGGAT ATGCAAAAGG AGAATTTTAT CTTGGAACGA TGTACCTAGC TGGTTTAGAA GTAGCACATG ATCCCAATAA AGGTGTATAT TGGTTAAAAA AATCTGCTGA ACAAGGAGAT GCAGAAGCAG AAGATTTTCT TGGAATGATT TACCTAGGTG GTTCAGGAGT ACCACACGAT TATAAAAAAG CTGCATATTG GTTTAAAAAA GCTGCACATC AAGGTGATGC TTTAGGAGAA TATCTTCTTG GTCGTATGTA CCAACATGGT TTAGGGGTAC CAAAAGATCA TAAAAAAGCT TCATATTGGA TTAAGAAAGC AAAAAAACAA GGACATGCAA AAAGAAAATA TTATCTTGAT GAACTTCGTA AATTAAAGCA CCTATTAGGT GGTTATTGA
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Protein sequence | MKKPYIIGGT ILLVLIGGFV FNRYVYSKIE YKKGLSYYKN KNYQKALPLF KYAANQGYAP AEEKLGYMYG RGRGVPQDYY EAVHWFKKSA KQGYAKGEFY LGTMYLAGLE VAHDPNKGVY WLKKSAEQGD AEAEDFLGMI YLGGSGVPHD YKKAAYWFKK AAHQGDALGE YLLGRMYQHG LGVPKDHKKA SYWIKKAKKQ GHAKRKYYLD ELRKLKHLLG GY
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