Gene HY04AAS1_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1116 
Symbol 
ID6743932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp1032290 
End bp1033792 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content38% 
IMG OID642750925 
Productprotein-export membrane protein SecD 
Protein accessionYP_002121780 
Protein GI195953490 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAGA ATATTTTTAT CAATATTCTT ATAGGGACTT TTATCATAAT AGGTTCTTTG 
CTGGTGGTGG CTTTTAAGCC AGTAAACCTT GGTCTTGACT TGAAAGGGGG CATAAGCATG
GTCTTGGCTC CCGATATAGA CAAAGTTATA AAAGAAGAGT ATGAAAACAC AGCCTCTGAT
ATATCAAAAC TTTTTTTGAA AAATCATATA AACGTCTTAG ATGTAACACC TTCTCAAGAT
GGTATATACA TAGATTTATT AAACGCTTCA GATTACAGCA AAGTTTATGA GCTTTTGACA
AAATACTACA AAAATAGAAT AGATATTTCC AAAGTATCAC CTCTTAAAGT TAAAGTTAGA
TTTAGCTCTA TTTATCTTAG TCAGATAAAA GAAAACGTTA TCACTCAAAC GGTGGAAGTC
CTAAGAAGAA GAGTAGACCA ACTTGGCGTA GTGCAACCTG TAATTACAAG GCTTGGCAAT
TCTAAAGTTA TGGTGGAGCT ACCCGGTGTT ATGGATTTAG AAAGGGCTAA AAAAGTCCTT
GGGAAAACCG CTCAGCTTGA GCTCATGGAA GTGGTGGACG CATCAGCTTC TTTAGATGCT
TTACAAAAAG AATTAAAACC AGATGAAAAG ATATTGCCAT CAAAAGATGG ACATGAATGG
TATTTAGTTA AGAAAAAACC TATAATAACA GGGGCTGATT TAAAAACCGC TTACGAGAGC
ACCGATAGCT TTAACAACCC TGCTGTTAGC TTTGAACTAA ATTCAAAAGG AGCTGAAATA
TTTGGTAATT TTACCCAGAG CCATATAGAT AAAAGGCTTG CTATAGTCCT TGACAACAGA
GTTATGTCTG CTCCAGTTAT TCGTTCAAGA ATATCAGATC AAGGTCAGAT AACTGGTAAT
TTTACACCAG ATCAAGTAAG GGACTTGGCC GCTATTTTAA GAGCCGGTGC ATTGCCTACA
ACGCTTCACA TACTCCAAGA TGCTGTGGTA GGGCCCACTT TGGGAAAAGC GGCTATAAAA
CAGAGTATCT ATGCTGGTTT AGCGTCGTTT TTGTTTGTGG TGTTTTTGAT AATAACAAGG
TATAAGACAG CAGGGGTCAC AGCCACTATA GCTATAATAA TGAATGGGCT TCTTCTTTGG
GCTGGTCTTG TGCTTTTAGG AGCTACACTT ACATTGCCAG GTATTGCAGG TATCATACTA
AATATGGGTA TAGCGGTAGA CTCAAACGTT CTTATTTTTG AGCGTATAAA AGAAGAAATA
GCAAGGGGCA ACACCCTAAG GAAAGCCGTA GAATACGGTT ATAAGAGAGT GCTTAGTGCC
GTTTACGATA CACACGCCAC ACTTCTGGTG GCAGCTTTGA TACTTTTTCA ATTTAGTAGC
GGTCCAGTGA AGGGCTTTGC CACCACACTT ACTATTGGTA CCATAGCATC GTTTTTGTCA
AATGTTTATT ATTCAAAAGT GATGATAGAC ATCTTAGCGA AACTAAGAAT GCTTAAGATA
TGA
 
Protein sequence
MPKNIFINIL IGTFIIIGSL LVVAFKPVNL GLDLKGGISM VLAPDIDKVI KEEYENTASD 
ISKLFLKNHI NVLDVTPSQD GIYIDLLNAS DYSKVYELLT KYYKNRIDIS KVSPLKVKVR
FSSIYLSQIK ENVITQTVEV LRRRVDQLGV VQPVITRLGN SKVMVELPGV MDLERAKKVL
GKTAQLELME VVDASASLDA LQKELKPDEK ILPSKDGHEW YLVKKKPIIT GADLKTAYES
TDSFNNPAVS FELNSKGAEI FGNFTQSHID KRLAIVLDNR VMSAPVIRSR ISDQGQITGN
FTPDQVRDLA AILRAGALPT TLHILQDAVV GPTLGKAAIK QSIYAGLASF LFVVFLIITR
YKTAGVTATI AIIMNGLLLW AGLVLLGATL TLPGIAGIIL NMGIAVDSNV LIFERIKEEI
ARGNTLRKAV EYGYKRVLSA VYDTHATLLV AALILFQFSS GPVKGFATTL TIGTIASFLS
NVYYSKVMID ILAKLRMLKI