| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1108 |
|---|
| Symbol | |
|---|
| ID | 6743924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1025319 |
|---|
| End bp | 1026137 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642750917 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002121772 |
|---|
| Protein GI | 195953482 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.866947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA AGAAATTGTT TTTTGCAATA AGCGGGTTGG CGATTCTTCT TAGCTCTTGT
GCAGAGCCGA CACAGCAAGG GCCAAATCCA ATAACTATGC TTCAGCAACA GTATCAATAT
CAACAACAAG AAATCAACGA AATAAATAGA AGGCTAGATT CTTTGGATGA GTCTTTGGCA
AAATTGAGGG TAAAGCTTGG GCTTTCTACA TACAACAATA TTACAAAAAA CCTTGGAGAA
TCTGAGTCTC AAACCCCACC AGAATCTTCT GAAACACCGC CATCACCTTC AAACCTTAGC
TCTTTACCAG CTATAACCCC TTCAAAAGGC ATAAAAAATC TATCAAGCAC CGTTACTATA
ATAAATTCTA CAGCTCCTTC TGAAACTCAA AGTTCATCTT CCAATTTGCA AGCCCTCATC
TCAAACACGC CTCAAAGCCC TCAAGAACTA TACGGAATGG CTTACACAGC TTATCAATCT
GGAGATTATC AAAAAGCTAA GAGACTTTTC AAAGAGTTTA TATTGAAAAA CCCACATTCA
AAACTTACAA ACAACGCATA CTACTGGTTA GGAATGGCTG AAAAAGCCAT GCATCATAAC
AATGAAGCGT TGGCGATACT GCTATCTTTG ATAGATAAGT GTAAAAAAGG TGAATTACCC
TCTTGTGATA AAGCGCCTTC GGCGTATTTT TCTGCGGCGA ACATATATAG AGAAATGGGA
CAAAAATCAG CGGCTATAAA CTTATACAAG GAGCTTATAA AACTTTACCC AAATAGTATA
GAAGCGGCTT TAGCAAGATC CGAATTAGAG ATTAAATGA
|
|---|
| Protein sequence | MKKKKLFFAI SGLAILLSSC AEPTQQGPNP ITMLQQQYQY QQQEINEINR RLDSLDESLA
KLRVKLGLST YNNITKNLGE SESQTPPESS ETPPSPSNLS SLPAITPSKG IKNLSSTVTI
INSTAPSETQ SSSSNLQALI SNTPQSPQEL YGMAYTAYQS GDYQKAKRLF KEFILKNPHS
KLTNNAYYWL GMAEKAMHHN NEALAILLSL IDKCKKGELP SCDKAPSAYF SAANIYREMG
QKSAAINLYK ELIKLYPNSI EAALARSELE IK
|
|---|
| |