| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1048 |
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| Symbol | |
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| ID | 6743863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 979189 |
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| End bp | 980049 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750856 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_002121712 |
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| Protein GI | 195953422 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000711515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAG TTTTAATTGC TAAAAATGCA GGATTTTGTT ATGGGGTTAA AAGAGCTATT
ACACTTGCCG AAAGAGCAGC CAAAGAGCAA GAAAAAATAT ATACGTTGGG CCCTCTTATC
CATAACCCCC AAGAAGTAAA CAGGCTTTCC AACATGGGTA TAAAAACCGC CACCGATACA
AACATAGATA AAGATGCCAC GGTGATAGTA CGCTCTCACG GTATATCTCC AGAAAAAGAA
AGGCTTTTAA GAAATACGTT TGTTAAGGTT GTAGACGCCA CTTGCCCTTA CGTTAAGGCT
GTTCATGAGG CTGTTGTATC GCTTGCAAAA GAAGGTTACT TCGTAGTAAT AGTAGGGGAA
AAAGATCATC CAGAAGTTCA AGGAACAGTA GGATATTTAG AAGAAGCAAA AGGACGATAC
AAGGTTATAG ATTCTCTTGA AGATTTGGAA GATATAAAAG AAGATAAAGT TGGAATAGTA
GCTCAAACCA CTCAAAATGA AATATTTTTT GAAAATGTAG TTTTAAAGCT TTTAAAAAAG
GTAAAAGAAA TAAAGGTAAT AAACACCATT TGCAACGCCA CAGAAGAGAG ACAATCAGAT
ATATACGAGC TCGCCCCCAT AGTGGATGTG ATGATAATAA TAGGTGGTAA AAATAGCGGT
AATACCAAAA GGCTTTTTGA GATAAGTAAA TCTTTGAACC CACGGTCTTA TCACATAGAG
ACAAAAGACG AGATTGACCC AAGCTGGTTA GAAGGTGCAA AAACCATAGG TATAAGCGCA
GGTGCATCAA CTCCAGATTG GATTATAGAA GATGTAAGAT ACTTTTTAGA AAATCATGAA
AACTTCACAG AAAAGCTTTA A
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| Protein sequence | MPKVLIAKNA GFCYGVKRAI TLAERAAKEQ EKIYTLGPLI HNPQEVNRLS NMGIKTATDT
NIDKDATVIV RSHGISPEKE RLLRNTFVKV VDATCPYVKA VHEAVVSLAK EGYFVVIVGE
KDHPEVQGTV GYLEEAKGRY KVIDSLEDLE DIKEDKVGIV AQTTQNEIFF ENVVLKLLKK
VKEIKVINTI CNATEERQSD IYELAPIVDV MIIIGGKNSG NTKRLFEISK SLNPRSYHIE
TKDEIDPSWL EGAKTIGISA GASTPDWIIE DVRYFLENHE NFTEKL
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