| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0894 |
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| Symbol | |
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| ID | 6743706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 841187 |
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| End bp | 843289 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750700 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002121559 |
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| Protein GI | 195953269 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACA AATTCTTTAT AGACAAAACA AAAGAGATTT TAAAAACTTA TAACCTTTCT
CCAGACAAAC ATCCACCTAA ACTTTCCAAA GAAGAAGCTA TAAAAATAAT CAATACGTTA
AGAGAGCTTA TAAATTATCA CGACTATAGA TATTATGTGT TAAATCAACC CGTTATATCA
GATGCTGAGT ACGATGCTAT TTATAAATTT CTTAAAAGCA TAGAAGATAA TTATCCAGAC
TTGATAACCC CAGACTCACT CACTCAAAGG GTATCTTCCG ATATATCAAG CACATTTCCT
CAAGTAAAGC ACTTAGCACC GATGCTTTCT TTAGACAACA CTTACAACGA AGATGACTTA
AGAGATTTTG ATAGAAGAGT AAAAGAATTA AGCGGAAAAG AACATATAGA ATACTGCGTT
GAGCCAAAAT ACGACGGAGC TGGTATATCG CTTTTATACG AAAACGATCT ATTTGTAAGA
GGAGCTACTA GAGGAGATGG GGAAGTAGGT GAAGATGTTA CTAAAAACCT AAAAACTATC
AAGACGATAC CACTAAGGGC AAATTTTTCA AAACAAGGTA TTAGGCTTTT AGAAATAAGA
GGAGAAGTCA TAATAAATAA AGATGATTTT AAAAAGATAA ACGAAGAGAG GATGGCGGAA
AACTTACCTC CTTACGCAAA TCCAAGGAAT TTAGCGGCTG GTTCTATAAG ACTTCAAGAC
CCCCAAGAAG TAGTCAAAAG ACCTCTAACA GCCCTTGTCT ACCAAATAAC ATACGTAGAA
CCCACAAACA ATATGCCAAA AACTCACTAC GGAGCTATAA AAATGCTTCA TGATCTTGGT
TTTAAAACGC CGTTTTTGGA TATGAAACTC TGTAAAAATA TCCAAGAGGT TATAGATTAC
TGTAGATACT TTGAATCAAA AAGAGAATCA CTACCTTATG AAATAGATGG AATGGTGATA
AAAGTAAACG ATATATCTTT GTACGATGAA CTAGGTTTTA CATCGCATGC TCCAAGATGG
GCCACTGCTT TTAAATTTAA AGCAAAACAA GCCACTACCA TAATATTAGA TGTGATATTT
AGTGTTGGAA GAGTAGGCAA TATAACACCA GTGGCAAAAT TAGAACCGGT ATCTTTGGGC
GGGGTTACCA TATCAAGTGT TTCTTTGTTC AATGAAGATT TTATAAGAGA AAAAGATATA
CACATAAAAG ATACGGTTAT TATAGAAAGG GCTGGTGAGG TGATACCTTA TGTGGTTAGC
GTTGTAAAAG AAGCAAGGCC CAAAGATGCC AAGCCAATCG TTTTTCCAAA GTATTGTCCT
TCTTGTGGTT CTAAGCTTGT AAAAGCCCCC GGCGAAGTGG CTTGGAGGTG TATAAATATA
TCCTGCCCAG CTCAAGTGGT GTTAAGGATT AGGCATTTTG CATCAAAAGA TGCAATGGAT
ATAAAAGGTT TAGGGGAAGC TGTGGCTCAG CTTTTGTACG ATGCCAAACT TGTGAAAAAT
ATAGCAGATA TCTACTATCT TAAATTTTCA GATTTGGTAA GGCTTCCAAG GTTTGCCAAA
AAATCAGCTC AGAATCTTAT AGATGCCATA GAAGCTTCAA AAAGAAGAGG CCTAGCAAGG
GTGTTATATG GTCTTGGCAT AAGATACGTA GGGCTTACCA CTGCAAAAAA ACTTGCTTCA
TATTACAAGG ATATATGGAA TATAGTAAAA GCCTCAGAAG AAGACTTAAG AAATATAGAG
GATATAGGGG ATATAGTTGC AAGAAGTATA AAAGAGTTTT TTGGCTTGGA GCAAAATATA
AATACGATAA AAAGGTTAGA AGAAGCTGGT GTACTTTTAA AAGAAGTATC TGAAGCTGTG
TCTAATAAGC TTGCCGGTTT ACAATTTGTT TTCACGGGCA CACTTTCTTG TTGTACCAGA
GAGGTAGCCA GACAAATGGT AGAATCCCTT GGAGCCACTA CATCAGATAG CGTAACTCAT
CATACATCTT ACCTTGTGGT AGGACAGGAT CCAGGTGCTA CCAAACTAAG AAAAGCAAAC
ATGCTAGGTA TCAAAACTAT AAGCGAAGAG GAGTTTTTAA GGCTTTTAGA AGATAGCAAG
TAA
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| Protein sequence | MNDKFFIDKT KEILKTYNLS PDKHPPKLSK EEAIKIINTL RELINYHDYR YYVLNQPVIS
DAEYDAIYKF LKSIEDNYPD LITPDSLTQR VSSDISSTFP QVKHLAPMLS LDNTYNEDDL
RDFDRRVKEL SGKEHIEYCV EPKYDGAGIS LLYENDLFVR GATRGDGEVG EDVTKNLKTI
KTIPLRANFS KQGIRLLEIR GEVIINKDDF KKINEERMAE NLPPYANPRN LAAGSIRLQD
PQEVVKRPLT ALVYQITYVE PTNNMPKTHY GAIKMLHDLG FKTPFLDMKL CKNIQEVIDY
CRYFESKRES LPYEIDGMVI KVNDISLYDE LGFTSHAPRW ATAFKFKAKQ ATTIILDVIF
SVGRVGNITP VAKLEPVSLG GVTISSVSLF NEDFIREKDI HIKDTVIIER AGEVIPYVVS
VVKEARPKDA KPIVFPKYCP SCGSKLVKAP GEVAWRCINI SCPAQVVLRI RHFASKDAMD
IKGLGEAVAQ LLYDAKLVKN IADIYYLKFS DLVRLPRFAK KSAQNLIDAI EASKRRGLAR
VLYGLGIRYV GLTTAKKLAS YYKDIWNIVK ASEEDLRNIE DIGDIVARSI KEFFGLEQNI
NTIKRLEEAG VLLKEVSEAV SNKLAGLQFV FTGTLSCCTR EVARQMVESL GATTSDSVTH
HTSYLVVGQD PGATKLRKAN MLGIKTISEE EFLRLLEDSK
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