Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0886 |
Symbol | |
ID | 6743698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 833843 |
End bp | 834685 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642750692 |
Product | spermidine synthase |
Protein accession | YP_002121551 |
Protein GI | 195953261 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATG TATATTTTAT GGAGAGAGAC CCTTATGCAC CTATAAGACA TTGTTATGGC ATAAGCAAAA TCCTTTACGA AGGCAAGTCA AAATATCAAG AGATTCAAGT AGTAGAGTCC CATTACTTTG GTAAAATATT GATACTTGAT GGTGTAGTGC AATTTACAGA AAAAAACGAA TTTTTCTATC ACGAAATGCT AACTCATCCT GTAATGTTTG CTCATAAAAA TCCCCAAAAT GTGCTAATAA TAGGTGGAGG AGACGGTGGC ATCCTAAGAG AGGTTTTAAA ACACAAGTCT GTAAAGAAAG CTGTATTGGT GGATATAGAT AAAGATGTAG TAGAAGTGTC TAAAAAGTTT TTCCCCACCG TCGCTTGTTC GATGGATGAT CCTAGAGCTA TCATACTAAA TGAAGATGGT TTTAAATACA TTCAAGACTA TAAAAATGAG TTTGATGTTA TCATAGTAGA CTCTACAGAT CCTGTTGGTT TCGCACATGT ACTTACCACA GAAGAGTTCT TTAAATATGT GTTTGAAGCT TTAAAAGAAG ATGGTATATA CGTTGGACAA TCTGAATCTT TGCACTATCA TCTTGATATA GTTGTGCGTT TTCAAAAAGC TTTGAAAAAA AGCTTTCCTA TAGTAGACCT TTACACCACC GTTATACCAG TATACGCTGG GTATTGGTGG AGTTTTTCAG TGGGTTCCAA AGTTTACAAT CCACGAGAAA TATCAAGAGA AGTTGATGTA GAAACGAGAT TTTACTCAGA TGAAATACAC AAAAACGCAT TTTTGCCACC AAACTTTTAT CAAAAGATTT TAAACGGTAA TTTTAAATAT TGA
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Protein sequence | MKDVYFMERD PYAPIRHCYG ISKILYEGKS KYQEIQVVES HYFGKILILD GVVQFTEKNE FFYHEMLTHP VMFAHKNPQN VLIIGGGDGG ILREVLKHKS VKKAVLVDID KDVVEVSKKF FPTVACSMDD PRAIILNEDG FKYIQDYKNE FDVIIVDSTD PVGFAHVLTT EEFFKYVFEA LKEDGIYVGQ SESLHYHLDI VVRFQKALKK SFPIVDLYTT VIPVYAGYWW SFSVGSKVYN PREISREVDV ETRFYSDEIH KNAFLPPNFY QKILNGNFKY
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