| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0850 |
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| Symbol | |
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| ID | 6743661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 800498 |
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| End bp | 801637 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750656 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002121515 |
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| Protein GI | 195953225 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000138704 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGAA ATAAAAAGAT TGGTATAGCC GTATTGGTAA TACTTATTGT TATATTCTCA
GTAGTTGCCT TTAAATGGAT ATACTACAGG ATCACACATG CGGTTTCCGA TGCAGTGTTT
GTGGAAGCAA ACACCTTTAC AGATGTAGCT TACAGAAGAG ATAGTGGAAG AATTATAAAA
CTATTCAAAA AAGAGGGAGA CAAAGTCCTA AAAGGCGAAC CTTTGGCAAA AATTGACGAT
ACAGATTATA AATTAGAGTA TAAAGCTTTA AAGTATCAGA TTAAAGAGCT TGAGAGCGAA
ATAAACCTTT ATAAAATCCA AAGGGATAGG CTTTTAGTAG GTACAGGACT GGAAGCTCAA
GCTAATCTAT ATAGAACTAT GGAAGCTACT CAAAATATGC AATCTATTAT GAACAAAGTA
AAAGCTTTAG ATGCAAAGAT ATCTTTAGTG AATAAAGACT ATCATAGATT TCACAAACTT
TATAAAGACG GCGTTATATC AAGACATGCT TTTGAAGAAA AAGAGACAGA GCTTAAGAAC
CTTCTAAACG AAAAAAACGC ACTGTTAAAT CAAGCTAACG CCATGGCTTC TTTATCAAAA
GCTCAAAACT TAGGTGTAGC TATTGCAAAA AACAACCAAA AGCAGGTAAA AGAATTAACC
CAAAAGATAG ATGCTACAGA AAACCAGATA AAATCTCTAG AAGCAAAACT TCAAAATGTA
TCTGATATGA TAGTTGAGAC AGAACTCACC AGTCCTATAT CAGGGTATAT AGTAAAAAAG
TTTGTAAGCG TGGGTGATGT AGTAAAACCA GGCCAACCAA TATACGCTGT GTATAATCCA
AAATCTGTAT ATGTGCTTGA TATAATAGAC GAGACAAAAC TACACGGTAT AAAGAAAGGA
TGTTTGGTAC ACATACACAT AGATGCCTTG CCAAACGAAC ATTATGAAGG TGTGGTATCT
GAGATTTTAA GAGCATCCGC TGCTAAATTC GCACTCATAC CAAGAGACAT CACGGCAGGA
GAGTTTACAA AGGTAGCTCA AAGAATACCG GTAAAAATCA AAATTACAAA GGGTAATATC
AACCTTTTAA GGGTAGGATA TAGCGGTGAA GTGGCTATAG ATAGATGTGC CAATCATTGA
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| Protein sequence | MDRNKKIGIA VLVILIVIFS VVAFKWIYYR ITHAVSDAVF VEANTFTDVA YRRDSGRIIK
LFKKEGDKVL KGEPLAKIDD TDYKLEYKAL KYQIKELESE INLYKIQRDR LLVGTGLEAQ
ANLYRTMEAT QNMQSIMNKV KALDAKISLV NKDYHRFHKL YKDGVISRHA FEEKETELKN
LLNEKNALLN QANAMASLSK AQNLGVAIAK NNQKQVKELT QKIDATENQI KSLEAKLQNV
SDMIVETELT SPISGYIVKK FVSVGDVVKP GQPIYAVYNP KSVYVLDIID ETKLHGIKKG
CLVHIHIDAL PNEHYEGVVS EILRASAAKF ALIPRDITAG EFTKVAQRIP VKIKITKGNI
NLLRVGYSGE VAIDRCANH
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