| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0753 |
|---|
| Symbol | |
|---|
| ID | 6743558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 683711 |
|---|
| End bp | 685612 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642750553 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_002121418 |
|---|
| Protein GI | 195953128 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000430257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTC TAATACTTCT TTTCCCACTG TTATCTTTTA TAACGATAGG ACTATTTGGA
AGACGTATAG GTGATTTTGC CTCAGGTGTA ATAAACGCTG GTGCTGGTGT ACTGAGCTTT
ATAGTGGCTC TTATCACCAT GCTTTCTATG AAAGGTCCTG AAGATATAGT ATTTTACAAA
TTCTTACCGA TATCAAACAC ATCCGTAGAC ATAGGCATAT ATATAGATAA GCTATCTATT
ACCACTACAG TTACGGTTAC TTTTGTAGCC AGTGTTATAT TTGTATACGC AATAGGCTAT
ATGAGGTATC TTTTTGGCAA CTGGACGTTT AAATTCTTTG CATACTTTAG CTTATTCTTG
TTCTCAATGC TTCTTATACT GTTGGGGGAT TCTCTTATAC TTATGTTCTT TGGGTGGGAA
GGCGTTGGTC TTGCGTCTTA TCTTTTGATA GGGTACTTTC ATGAAGAGAA GTTTGCTACA
AAGGCAAGCT TAGAAGCCTT TGTAATGAAT AGAATAGGAG ACTGGTCTTT TATTTTAGGC
ATCATATACA CCTTTTGGTT GTTTGGGACG TTGTCGTTGC CAAAACTTTT TGAGAATGCC
AGTTATGTTC CTGGTATTAC ATTAGCAACG CTTCTTCTTT TTGGTGGTGC TGTAGGCAAA
TCAGGGCAAA TACCTCTTCA TACCTGGCTT CCTAACGCAA TGGCCGGTCC AACTCCTGTA
TCAGCTCTTC TCCACGCTGC TACCATGGTG GCTGCAGGTG TTTATATGGT GGCGAGACTT
TATCCAATAT TTTCTTTATC TCCGACAACG CTTAGCTACA TAACAATAAC AGGTGTTGTT
ACAATGCTTT TCGCGGCTTT GGTAGCTACA GTACACGATG ATATAAAAAA GATAATAGCT
TTTTCTACCA TGAGCCAGTT GGCAATCATG TTTACAGCCC TTGGTATGAG ATTTCCAACA
GCAGCTATAT TTCATCTTAC AACACACGCT TTCTTTAAAG CTCTTTTATT CTTAGCAGCC
GGTGCTGTGA TAACAGGGCT TCATCATCAT ACTCAGAATA TATTTGAGAT GGGCGGTATC
AAGAAATACA TGCCTATTAC ATTTGGAGCT TTTATGATAG GTGCTTTAGC ACTTTCTGGT
TTTCCTCCTT TTGCCGGTTA TTTCTCAAAA GATGCCATAG TATCTTTAAT AATGGATAAA
AATACACTTG TAGCTACTTT AATACTCATT ACATCTTTGC TTACAGCTTA TTACATAACC
AGAGAAGCTT TTGTGGTGTT CTTAGGAGAA GGACACTACC ATGAAGAACC TCACGAAGTG
GAACCTATAA TGAGCTTTCC AATGCTTATA CTAAGCTTTT TATCGCTTAT GGGTGGGTTT
TTGCTTTGGA ACTATTTCTC CTATATGAAT AGTCCTATAG AAGCACCTTT TTCTTTCTTA
GCACATTCTA TTTATGGTAT CACAGTGGCT ATAGTAGGCA TATCTCTTTC TTATCTTTTG
TATGTCAAAA AGTTTGTGGA TCCAAATATC CTTTATGAAC TATTTAAACC TATACATACT
CTTATGAAGT CCCAGTTTTA CACAGAATAT ATCTATCACA ACATAATAGC AAAAGGTTAC
CTTGCTATAT CAAGGCTTGT ATATAAAGCA GTAGACCGTA TAATAATAGA CGGGTTTGTA
AATGGGGTGG CAAAAGTATT TATGATTTTA GTAAGGTTTG TTTGGGAATT TATAGATATA
AGGTTTATAG ATATAATATT ACATAAGATT GTCATATGGA CTTTTTCTTT TGGTAGGAAA
TTAAAGATAA TTCAAAGCGG ATATTTAAAT CAATATATAT TTGTCATTCT CTTAGGAATT
GTGATAATAT TAGGACTTAT CATAAAAGGC ATGAGGTTGT AG
|
|---|
| Protein sequence | MQSLILLFPL LSFITIGLFG RRIGDFASGV INAGAGVLSF IVALITMLSM KGPEDIVFYK
FLPISNTSVD IGIYIDKLSI TTTVTVTFVA SVIFVYAIGY MRYLFGNWTF KFFAYFSLFL
FSMLLILLGD SLILMFFGWE GVGLASYLLI GYFHEEKFAT KASLEAFVMN RIGDWSFILG
IIYTFWLFGT LSLPKLFENA SYVPGITLAT LLLFGGAVGK SGQIPLHTWL PNAMAGPTPV
SALLHAATMV AAGVYMVARL YPIFSLSPTT LSYITITGVV TMLFAALVAT VHDDIKKIIA
FSTMSQLAIM FTALGMRFPT AAIFHLTTHA FFKALLFLAA GAVITGLHHH TQNIFEMGGI
KKYMPITFGA FMIGALALSG FPPFAGYFSK DAIVSLIMDK NTLVATLILI TSLLTAYYIT
REAFVVFLGE GHYHEEPHEV EPIMSFPMLI LSFLSLMGGF LLWNYFSYMN SPIEAPFSFL
AHSIYGITVA IVGISLSYLL YVKKFVDPNI LYELFKPIHT LMKSQFYTEY IYHNIIAKGY
LAISRLVYKA VDRIIIDGFV NGVAKVFMIL VRFVWEFIDI RFIDIILHKI VIWTFSFGRK
LKIIQSGYLN QYIFVILLGI VIILGLIIKG MRL
|
|---|
| |