| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0505 |
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| Symbol | |
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| ID | 6743301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 443893 |
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| End bp | 444966 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750296 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002121170 |
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| Protein GI | 195952880 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATA AAGATAAATA TTACATGAAA CTAGCTTTGG AAGAAGCATA CAAATACAAG
GGCCAAACCC ATCCAAACCC TGCAGTAGGA GTACTTATAG TAAAAGACGA CAAGATTTTA
TCAATAGGGG CCCATAAAAA AGCAGGTACT GATCACGCTG AGATCGTAGC TTTAAAAAAT
GCCCAAGAAG ATGTAAAAGG AGCTACGATG TATGTAACTT TAGAGCCTTG CTCATTTCAT
GGTAAAACAC CCCCATGCTG TCCTGCTATA ATCTCAAGCG GTATAAAAAA AGTTGTTATA
GGCTCAGTGG ACCCAAATCC AAAAGTCTCT GGAAAAGGCA TAGAGTGGCT AAAATCTGCT
GGTATTGAAG TAGAAGTAGG TGTATTAAAA GAAGAATGTG ATAAGTTAAA TGAGGATTTT
TTTGTTTATA TAACCCAAAA AAGACCTTTT ATAACCCTAA AATGCGCTAT GTCTTTGGAC
GGAAAACTTG CTAAAGAAAA CAAAGATAGC AAATGGATTA GCTCAGAAAA AGCAAGGAAA
ATATCTCATA TATATAGAAA GTACTCAAGC GCAATATTAG TGGGCATAAA CACCATCTTA
AAAGATAACC CAAAACTTAC CGTAAGGCTT GAAGGAAATG AATATCAGCC CTACAGCGTT
GTGATAGACC CAAACTTAGA CATTCCCTAC GATGCAAACA TATTTAAAAA AGGATATGAA
AACATCATTA TTATAGTTTC TACAAAAACC GATGATAAAA AGAAAGAATA CCTTAAATCC
CTTGGTGTTA GGCTTTTAGA ATTAGAAAGT TTTGATATAA AATCTATATT AAAAGCTCTA
TACGAGATAG ATATAATGCA CATTTTTGTA GAAGGAGGAG CTTATACAAT ATCAAGATTT
TTAGAAGAAA ATATGTGGGA TAAGATGCTT ATATTTAGAG GTTATAAATT TATAGGAAAA
GGTATAGGTC TTGATTTTTA TAGTGATTTT TCAAAGATAT ACAAAGGAAG TCTTCAAATT
ATCGACGATA CCACAGATTT GTTGGAAATT TACAATGGAT ATATCACTGT TTGA
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| Protein sequence | MINKDKYYMK LALEEAYKYK GQTHPNPAVG VLIVKDDKIL SIGAHKKAGT DHAEIVALKN
AQEDVKGATM YVTLEPCSFH GKTPPCCPAI ISSGIKKVVI GSVDPNPKVS GKGIEWLKSA
GIEVEVGVLK EECDKLNEDF FVYITQKRPF ITLKCAMSLD GKLAKENKDS KWISSEKARK
ISHIYRKYSS AILVGINTIL KDNPKLTVRL EGNEYQPYSV VIDPNLDIPY DANIFKKGYE
NIIIIVSTKT DDKKKEYLKS LGVRLLELES FDIKSILKAL YEIDIMHIFV EGGAYTISRF
LEENMWDKML IFRGYKFIGK GIGLDFYSDF SKIYKGSLQI IDDTTDLLEI YNGYITV
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