Gene HY04AAS1_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0406 
Symbol 
ID6743200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp352981 
End bp353445 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content37% 
IMG OID642750199 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_002121074 
Protein GI195952784 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.54432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAT ATAGTGATAT AGTTTTGGAT CACTTCCTTA ACCCAAGAAA CGTAGGAGTT 
TTGGAAGATG CCAACGGCGT AGGCCAATGT GGAAACCCAG CTTGCGGAGA CGCAATGCTT 
TTTACCATAA AGGTAAATCC ACAAAACAAT GTTATAGAAG ATGTGAGGTT TAAAACCTTT 
GGATGCGGTT CTGCCATAGC TGTTTCTTCT ATGCTTACCG AAATGATAAA AGGAAAAGAC 
ATAAACTATG CTCTAAATCT TACATACAAA GATATATTTG ACCAACTTGG TGGGTTGCCA 
CCCCAAAAAA TACACTGTAC AAATTTAGGT CTTGAAACAC TTCACGTAGC TATAAGAGAT 
TATCTTACAA AACAAGGAAG ATTAGAAGAG GCAAACGCTA TACCGACATG TTTTGAAGAG 
TCAGAGGAAG AAGAAAGTCA AGAGTTTGGT TTCTTAACCA CATAA
 
Protein sequence
MFEYSDIVLD HFLNPRNVGV LEDANGVGQC GNPACGDAML FTIKVNPQNN VIEDVRFKTF 
GCGSAIAVSS MLTEMIKGKD INYALNLTYK DIFDQLGGLP PQKIHCTNLG LETLHVAIRD 
YLTKQGRLEE ANAIPTCFEE SEEEESQEFG FLTT