Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0331 |
Symbol | |
ID | 6743125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 288253 |
End bp | 289302 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642750124 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002120999 |
Protein GI | 195952709 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT ATATACTTTT ATTGCTGGTG ATATTTAGTT TAGGTTTTTC GCAGGTATTG CCAAAACCCT CTGATATAGC CAAAGAAGTT CAAGCTGGGC ACTATCAAAA AGCAGAAGAT CTTTTAAAAG AAGTCTTGCA AAAAGACCCA AACTCCGCAA AAGCCCATTA TATGCTCTCT CAAGTTTACT ACATTGAAGG AAAATACAAC AAAGCTCTAA ATGAGTTAAG CATAGCAAAA AAACTTGACC CTTCAGAGTC ATTTGCCCAT AAAGGTTATT TAAAAAATTA CGAAAGGGAT TTAGAAAAAT CTGTCAAAGT CAAAAAGGGT ACTTTTGGAG GTGCTATGAT ATTTTTCTTA ATAGGTGGTT TACTGATAGT GGGGGCTGTA TTTTTGTACA TGTCAAACAA ACTTACAAAC AAAAGCAATC AAGATATAAA GACAAAGCTT ATGCAAGAGC TTACGTTGTA TCTTGAGAAT GTTGAAAAGG TGAAAACAAA ACTATCTATA GATTTGGTGT CTTTAAAAGA CGATGATCCA GCCAAAAAAG ATTTATCAGA CAGATTAAAC GAACTAAGCG AAATAAAACA AAATATGATA GATTTACTTC AAAAGCTTAA AAACAACGAA ATTCAAGACA TAGAAGGCTC CTATATATAT TTTGAAAATC TAAAAGACAA GCTAAAAGAA GTGGCTACAG GTGTTAAAAA CACCTATGAA AACCATGATG ATCTGAAAAA CCTTCAAAAT ACAAATACCC AGCAAAACTA TCAAAACCAG CAACCTATAG GACCTGGCAT GATGGGTGGT GGGATGTCTT TTATGGACTT GCTTGGCATG ATGGCGATGG GCTCTTTGAT GGGCTCTATA TTTAGCGGTG GTTTTGGAGG AGGCTTTGGC ATGGGTTCCA ACTATTACAA CGAACCGCCC ATAGATAACA CACAAGACAT AACAAACCAA GATACAGACA ACAACGTAGA TTTTAATGGC GGAAACGATT GGGGTTCTGA TGGAGATATA GATACAAATC AAGATGATTC TTGGAGTTAA
|
Protein sequence | MKKYILLLLV IFSLGFSQVL PKPSDIAKEV QAGHYQKAED LLKEVLQKDP NSAKAHYMLS QVYYIEGKYN KALNELSIAK KLDPSESFAH KGYLKNYERD LEKSVKVKKG TFGGAMIFFL IGGLLIVGAV FLYMSNKLTN KSNQDIKTKL MQELTLYLEN VEKVKTKLSI DLVSLKDDDP AKKDLSDRLN ELSEIKQNMI DLLQKLKNNE IQDIEGSYIY FENLKDKLKE VATGVKNTYE NHDDLKNLQN TNTQQNYQNQ QPIGPGMMGG GMSFMDLLGM MAMGSLMGSI FSGGFGGGFG MGSNYYNEPP IDNTQDITNQ DTDNNVDFNG GNDWGSDGDI DTNQDDSWS
|
| |