Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0309 |
Symbol | |
ID | 6743103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 269061 |
End bp | 269960 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642750102 |
Product | Polysulphide reductase NrfD |
Protein accession | YP_002120977 |
Protein GI | 195952687 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000856639 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGAC TTACTATGTA TTTTGGTAAC TATCAGCACT TTGTGCATCA AACAGCTTGG GGATGGATGA TAGCTGTTTA TCTTTTCTTA GGTGGCCTTG GTGGTGCCAT GGGTGCTTTG TCTTCTTATT TTTACCTTAT AAAAAAAGAA AATAACCCGG TGCTATTTGG GCTTTCTACA CTTCTTGGTA TAGGTCTTGT AAACTTTGGT GGTATATTTT TGCTTATACA TATGCTCAAA CCTTGGTTTG CGTTTTTTGT ATGGACTCAT CCTACCAGCT GGATATTTTG GGGTGCATCC TTTATTATGA TATACACTAT CACAGGTGCC ATTTGGGGAC TTTCGCTTAT ATCAGCTCAT ATTAACTTTC CTTTTTCTCA AAAGCTTAAA AACCTAAACA CTTCTTTAGT GGATAAACTT GGGTATATAA GCGGTGTTAT GGGACTTTTA ACGGCTGTTT ATACTGGGCT TTTGCTTTCT ACTGCACCAG CCATAACGCT TTGGTCAAAT CCTGGCTTAC CGGTACTTTT TATGGTATCT GCTCTTTCTA CTGCTACAGC TTATTTTATG CTGGTATCTC CTTCTCATAT AGCTCATGAA AATGAAAAAC TTGATATAGC TTTACTTGCA TTAGAGATTA TCATAATATC CGCTTTCTTT AACTACCTAT TTATATCAAG TGCCGCTGGT AAATTTATAA TCTCCAAAAT GCTTTCTTCT ATTGGTTTCA TGGGGTTTTT TGTAACACTT GGTCTTTTGG TGCCGTTTTT GCTTGAAATT TATGCCATCA AAAAGCACTC AAAATCTTTA GTAATATTGG CTTCTTTACT CGTTTTGATG GGCGGGTTTT TGCTTAGATT TTACATTCTA AAATTTGGAT ATTACACATA CCCATGGTAA
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Protein sequence | MDGLTMYFGN YQHFVHQTAW GWMIAVYLFL GGLGGAMGAL SSYFYLIKKE NNPVLFGLST LLGIGLVNFG GIFLLIHMLK PWFAFFVWTH PTSWIFWGAS FIMIYTITGA IWGLSLISAH INFPFSQKLK NLNTSLVDKL GYISGVMGLL TAVYTGLLLS TAPAITLWSN PGLPVLFMVS ALSTATAYFM LVSPSHIAHE NEKLDIALLA LEIIIISAFF NYLFISSAAG KFIISKMLSS IGFMGFFVTL GLLVPFLLEI YAIKKHSKSL VILASLLVLM GGFLLRFYIL KFGYYTYPW
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