| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0293 |
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| Symbol | |
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| ID | 6743087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 254405 |
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| End bp | 255364 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750086 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_002120961 |
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| Protein GI | 195952671 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000660268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGT TTATTTTTCC GATGAAAATA TATTGGGAAG AAAAAGATAA AAATTATGGT
AGGTTTGTTG TGGAACCCTT AGAAAGGGGC TATGGCACTA CAATAGGCAA TGCTCTTAGA
AGGGTTTTAC TCTCTTCTAT ATACGGTAGT GCTATCACCG CTGTAAAGAT AGAAGGTGTT
CAACACGAGT TTTCTACTAT TGAAGGTGTC CAAGAAGATG TTTTACAGAT TATAGCAAAT
CTTAAAAATG TTAGATTTGA CTTGAAAGAT TCTGATTTAG AGATTTTGTA TTTGGAAAAA
AATGCGCCAG GTGTTGTTTT AGCTTCTGAT ATCAAAACTC CTCCAAATGT CACCATTATA
AACAAAGATG CTTACATTGC TACGATAAAC TCTGCTAATA CAACTCTTAA AATGGAAATA
CGTATAGAAA GAGGCAAAGG TTATGTTATG TCTGATGAAA TGGAGCAAAT AGGAGAAGCC
GGATGGGTAG TGCTTGATGC TGATTTTTCT CCTATAAAAG TTGCAGCTTT TAGAGTAGAG
GCTACTAGAG TGGGTGACAG AACAGACTAT GATAAACTTA CTTTCGAGCT TACCACCAAC
GGTGTTGTAT CTCCAGATAC GGCTATTCAG CAAGCTGTAG AGCTTATAGT AAAACATATG
AATATGCTTA CAAATATATC TTATGAAGTA CCAACCTTAC CAGAGCCGAT GCCTCCCGAC
GAGTTAATGG AAAAGCTTAC ATTTTCTATA GAAGAGCTTG ATATTTCTCA AAGGGCTTTA
AACTCGCTGA AAAGGATAGG GGTAACAACC ATAGGAGAAC TTGTACAGCT TACAGAGGAT
GAGCTTAAAA GCTCTAAAAA TATAGGCAGA AAAGCTTTGA CTGAAATAAA AGAAGCTCTT
AAAAACATGG GTTTTTCTCT AGGCATGAAC ATAGGAGAAC AAAGAAGTTC AGAGGTGTGA
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| Protein sequence | MKEFIFPMKI YWEEKDKNYG RFVVEPLERG YGTTIGNALR RVLLSSIYGS AITAVKIEGV
QHEFSTIEGV QEDVLQIIAN LKNVRFDLKD SDLEILYLEK NAPGVVLASD IKTPPNVTII
NKDAYIATIN SANTTLKMEI RIERGKGYVM SDEMEQIGEA GWVVLDADFS PIKVAAFRVE
ATRVGDRTDY DKLTFELTTN GVVSPDTAIQ QAVELIVKHM NMLTNISYEV PTLPEPMPPD
ELMEKLTFSI EELDISQRAL NSLKRIGVTT IGELVQLTED ELKSSKNIGR KALTEIKEAL
KNMGFSLGMN IGEQRSSEV
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