| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0265 |
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| Symbol | rplC |
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| ID | 6743059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 240884 |
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| End bp | 241582 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750058 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_002120933 |
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| Protein GI | 195952643 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000658657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGGTC TTATAGGTAA GAAACTTGGA ATGATGAGAG TTTTTTTAAA TGATGGCACA
GCTATTCCAG TAACGGCTAT TAAAGTAGAA CCTAACTATG TGGTTTATAT TAAAAGCTCT
GAAACAGACG GTTATAATGC CATACAGGTA GGTAGCATTC CTTTAAAGCA AAGTAGATTT
AAAAAGCCAA TGGTTGGTCA TTTTAAGAAA GCCAATTTGA CACCTTTAAA ATATTTAAAA
GAATTTAGAG TAGATGATGT TTCTAGTTTC GCGTTAGGTC AGGAACTAGG TGTTGATATA
TTTTCACCTG GTGAGTTGGT GGATATAGTG GGAAGGTCAA AGGGTAGAGG TTTTACAGGT
ACCATGAAAA GATGGGATTT TGGTGGTTTT CCAAAATCTC ACGGTCATAG ATATCATAGG
GCTGTAGGTT CTGTGGGAAA TCGTACTGAT CCTGGTAGAG TTTGGAAGAG CAAAAGAATG
GCTGGAAGAC ATGGTAACGA AACTATAAGA GTTCAAGCTC TTGTAGTTGT GGATGTTTTA
AAGGATAAAG GAATTATTCT TGTGAATGGC TCTGTGCCTG GTCATAAAGA TGGAATTGTA
TATATAGAAA AGAGTCATAT TGCCTTTAGG AAGAAAGCTC AAAGGAAGCA GGATCGTTTG
TCTTTTATAC CATCAAATCT TTTAAGGCAG GAAGTGTGA
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| Protein sequence | MIGLIGKKLG MMRVFLNDGT AIPVTAIKVE PNYVVYIKSS ETDGYNAIQV GSIPLKQSRF
KKPMVGHFKK ANLTPLKYLK EFRVDDVSSF ALGQELGVDI FSPGELVDIV GRSKGRGFTG
TMKRWDFGGF PKSHGHRYHR AVGSVGNRTD PGRVWKSKRM AGRHGNETIR VQALVVVDVL
KDKGIILVNG SVPGHKDGIV YIEKSHIAFR KKAQRKQDRL SFIPSNLLRQ EV
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