| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0218 |
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| Symbol | tgt |
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| ID | 6743007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 198514 |
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| End bp | 199644 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750008 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_002120888 |
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| Protein GI | 195952598 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.989201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAGA TAGAAAAAAC CAATGGTTTA GCAAGGGCTG GTATATTATC AACTTTACAT
GGTGATATAT TAACACCTGT TTTTATGCCG GTGGGTACAA AGGGTACTGT AAAAGCCATG
ACTCACCGTT TGTTAGAAGA GCTTGGTACT CAAATCATCC TTGGAAATAC CTATCATCTT
TACTTAAGGC CAGGACCTGA GCTTATAGAA AAGTTTGGTG GTCTTCATAA ATTTATCAAC
TGGAATAAGC CTATTCTTAC AGATAGCGGT GGTTTTCAAG TATTTTCTTT GTCTAAGAAA
AATAGCTCAA ACGTCAAGAT AACAGATGAT GGAGTTTATT TTAAAGACCA CCTTCAAGGG
GATAAACATC TTTTTAGCCC TGAGAAAGTG ATAGAAATTC AAGAGATATT TGGCTCAGAT
ATCATGATGC CAATAGATGA GTGTATCTCT TTACCGGCTT CTTACGAATA TACCAAAGAA
GCTCTTTATA GGACTATAAG ATGGCTAGAG CGTTCCAAAA AAGCCAAAAA ACGAAAAGAC
CAAATGCTTT TTGGCATTGT TCAAGGCGGT GAATATAAAG ATTTAAGAAA GCTTTCTGCA
AGACTTACTG TAGAATTTGA TATGGATGGT TATTCTATCG GTGGCTTGTC TGTGGGGGAG
TCAAAAGATA TCATGTATTC TATGACCTAT TACGTTGTAG AAGAACTGCC GTTTGATAAA
CCCCATTATC TTATGGGCGT TGGAAAACCA GAGGATATAT TGGAAGCCAT TTCTCTTGGA
ATAGATATGT TTGATTGTGT GATTCCTACA AGAAACGCCC GTACTGGGCT TTTATACACA
TCAAAAGGTG AACTTGTTTT AAGACATGAG CGTTATAAAG AAGATCCAAG ACCTGTGGAT
GAAGAATGTG AATGTTATAC CTGTAAAAAC TTTTCAAGGG CTTATTTGAG ACATCTTTTT
ATGATGGAGG AAATATCTTC TTATATTTTA AATACTATTC ACAATCTTCA CTTTTTCTTA
AATCTTACCA AAAAAGCCAG AGAAGCTATA ATCCAAGGTA GGTTTTTGGA TTTTAAAAGC
CAAATGTTAG AAAAGTTTAA TATGAAAAAT CATAGCATAA ACTTAAACTA A
|
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| Protein sequence | MFKIEKTNGL ARAGILSTLH GDILTPVFMP VGTKGTVKAM THRLLEELGT QIILGNTYHL
YLRPGPELIE KFGGLHKFIN WNKPILTDSG GFQVFSLSKK NSSNVKITDD GVYFKDHLQG
DKHLFSPEKV IEIQEIFGSD IMMPIDECIS LPASYEYTKE ALYRTIRWLE RSKKAKKRKD
QMLFGIVQGG EYKDLRKLSA RLTVEFDMDG YSIGGLSVGE SKDIMYSMTY YVVEELPFDK
PHYLMGVGKP EDILEAISLG IDMFDCVIPT RNARTGLLYT SKGELVLRHE RYKEDPRPVD
EECECYTCKN FSRAYLRHLF MMEEISSYIL NTIHNLHFFL NLTKKAREAI IQGRFLDFKS
QMLEKFNMKN HSINLN
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