Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0208 |
Symbol | |
ID | 6742997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 185773 |
End bp | 188616 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642749998 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002120878 |
Protein GI | 195952588 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAGT TTAGGGTTTG TCCCCATGAT ACACAAAAAG GACTTGACAA ATGGCTTAAT ATAGCTAAAA AGATAAAAGA AATTTTTGGC CAAGAGGTGG AGCTTAAGCC TTTTAAAAAC TTTGACGAAG AATACGCTTA TTTTTCTAAG GACGATTTTA AACCAGATAT TTATTACGCA AGCTTTGATA TGACGCTTTT GCTTTTAGAT AAGGGCTATA AGATCATAGG CAAATTTAAA AATGAAAATG ATGTTTTTTT GTTGGTAAGC CGAAAAAAGT TTAACGATGA AGAACCAAGC AATATAACAA TTGTAGATAA GCTAAATTCT TTTTATGTCT TATACGATAT GGATTTTTAC GACAAAAATA TAGTCTTGTC AGAGTTCTAT GATGATGTTG TAAAAAAGGT GATAAGCGGC GAAGTAGAAT TAGGGCTAAT ATTTAAAGAA TACTACGATC AATTAGACCA AGAAACCAAA GACAGCATAA ACATCGTAAA GGAAATATCT TTGGATGCAG GTCATCACTT CTTGGTGTCA AAAGAATTTT ATGAAACACA TCAAAATAGT ATAAAGGCTT TTATAAAAGC CTTGGAACTG GAAGAAATCT CTGAAGAAAA CACGAATAAA CTAAAGATAT ATCAAAAATC TGGAAATATT ATCAGAGAAT CTGTAATCCG TAGCATGCTT GTAGAAAGCT TAAAAGATAT AAACCAGGCG ATAATATCTG CTGATACGGA AGAAGAGCTT TTTGAGCGAA TATGCCAAAA TCTTGTAAAT AAAAGCCGTT TTAAATTTGT ATGGGTTGGG AAAAAAGAAG GAGAGTTCAT AAAACCAGTG CATAAATGCG GTGAAGACGA TGGATATGTG GATAGTCTTA AAATAAGCGT AAGAGAAGAT GTCCCAGAAG GGATAGGACA AACTGGCATA GCTTATAGGG AAAATAGGAT TGTTATAAAC GAAAACACAT TAACATCAGA TCTTATGAAA GCTTGGAAAG ATGAGCTTTT AAAAAGAGAT ATATATTCAT CGTTAGCTGT ACCTATAGAA AAAAATGGAG AAGTTTATGC GGTAATAAGC GTTTATTCTA TTATACCGTT TTCTTTTAAA AAAGAATTTA TGACAATATT TGAAGAGCTT AAAAAAGATG TATCTTTTGC TTTGGAGAAG ATTGATAAAG ACAAAGAAAG TATCGTTTTA AGAAAAGCCA CAGACGATGC AAAAATGTGG CTTCTTATAA CAAGCAAAGA GGGTCTGATT GAGTACGTCA ATCAACATGT TTTAGATTTG ACAGGTTATA AAAAAGAAGA GGTGATAGGC AAAAGCCCAA AAATGTTTAA CTCCGAATAT CAGAGTGATA ATTTTTGCGA TGAGGTATGG AGAACCGTTT CGTCAAACAA ACCTTTTTCT GCAATATTTG CATACAAGAC AAAAAATGAA AATGTTATAT ACATAGATCA GACTATATAT CCAGTGGTGC TTAACGACGG AACCATGAAA TTTTTATTCG TTGGCAAAGA CATCACCAAT GAAAAAGTAT TGAGCCAAGA GCTTGATAAA TACAAATTTT ACGATACTCT TACCGAACTG CCAAACTTTT TAGCTTTTAA GTTTTATGTT TCAGATGTCG TTGAAAGCAA AAGATACAAA GATTTTGCTT TGATACTTAT AGATATTTAC AACATGTCTT TTGTTAACTC CACCTATGGG TTTGATGTGG GCAACGAAGT ACTAAAAGAG GTAGCAAATA TCTTAAAGCA AGAGTTTAAA GAGGGATTTG TGGCAAGGAT CGGAAACGAT GAATTTGGCA TATTTGTCCC AGATATAGAA AGTGAATCTA TTTTGATATA TAAGATTAGA AGCCTTTTGG ATAGAAAGAT AAAAACCTCT AAAAACTATA TTAGCATATC CTACAACGTT TCTATCGTAT TATCTGATGT TGCTAATACT GATTTTGAAG AAGTTTACAA CAACGCCGTT GTCACCCTAA ACCTTTCTAA GAAAGAGGGT GAAAACGTTA TAAAGTTTTA TGAATCTGAG GTAAACACAA GATTACAAGA GTATATAACG TCAGAAAATC TTGTGGAAAG AGCTTCTGAA GAGAATTTGT TTAGGTTTTA TTTTCAACCT TATCTTAATT CAAAAGATTT GAAAATCGTA GGTTTTGAAT CTCTTATAAG AATAGTAGAT AAAGACGGTA CTGTCTATGC ACCCTATAAA TTTATAGATT ACCTTGAAAA TAGTAAGTAT ATCATGCATT TTGAAGAATG GGCTTTAAAA GAGATATCTG ATAAGATAAG AATATTTAAA TCTTTAGACA AAGATATATC TATATCTTTG AACTTATCGG CAAAAGGGAT CTTAAGCTTA CCAGATGAGG ATTTTATTGA AAAATTGGCT TCTGTGCCTG TGGATGTTCA AGATAATTTA GTTTTAGAAA TTACAGAAAG AAACATTATA AAAAATGTAG AAAAATCCAA AAAGATATTT AGAAGTATAA AAGAATTCAA CAAACATATT AAAATATCAA TAGATGATTT TGGCACTGGT TATTCATCGC TGGCTTATCT AAAACACCTT CCGATAGATA TACTTAAAAT AGATATATCT TTTATAAGAG GTATTGCAAC CGATAGGCAC GATTTTTCCA TAGTAAAGTT TATAACCGGC TTATCCAAAG ATTTTGGTTT TAAGACTATA GCAGAAGGCG TAGAAACAAA AGAACAAGTA GATATGCTTT CATCGATGGG AGTGGATTAT TTTCAAGGAT TTTATTTTGC TAAACCCATG CCAGAAAATG AGGCTATAGA GTTTGTCTTG GAGGATATGA AAAAAAGCAA ATGA
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Protein sequence | MIEFRVCPHD TQKGLDKWLN IAKKIKEIFG QEVELKPFKN FDEEYAYFSK DDFKPDIYYA SFDMTLLLLD KGYKIIGKFK NENDVFLLVS RKKFNDEEPS NITIVDKLNS FYVLYDMDFY DKNIVLSEFY DDVVKKVISG EVELGLIFKE YYDQLDQETK DSINIVKEIS LDAGHHFLVS KEFYETHQNS IKAFIKALEL EEISEENTNK LKIYQKSGNI IRESVIRSML VESLKDINQA IISADTEEEL FERICQNLVN KSRFKFVWVG KKEGEFIKPV HKCGEDDGYV DSLKISVRED VPEGIGQTGI AYRENRIVIN ENTLTSDLMK AWKDELLKRD IYSSLAVPIE KNGEVYAVIS VYSIIPFSFK KEFMTIFEEL KKDVSFALEK IDKDKESIVL RKATDDAKMW LLITSKEGLI EYVNQHVLDL TGYKKEEVIG KSPKMFNSEY QSDNFCDEVW RTVSSNKPFS AIFAYKTKNE NVIYIDQTIY PVVLNDGTMK FLFVGKDITN EKVLSQELDK YKFYDTLTEL PNFLAFKFYV SDVVESKRYK DFALILIDIY NMSFVNSTYG FDVGNEVLKE VANILKQEFK EGFVARIGND EFGIFVPDIE SESILIYKIR SLLDRKIKTS KNYISISYNV SIVLSDVANT DFEEVYNNAV VTLNLSKKEG ENVIKFYESE VNTRLQEYIT SENLVERASE ENLFRFYFQP YLNSKDLKIV GFESLIRIVD KDGTVYAPYK FIDYLENSKY IMHFEEWALK EISDKIRIFK SLDKDISISL NLSAKGILSL PDEDFIEKLA SVPVDVQDNL VLEITERNII KNVEKSKKIF RSIKEFNKHI KISIDDFGTG YSSLAYLKHL PIDILKIDIS FIRGIATDRH DFSIVKFITG LSKDFGFKTI AEGVETKEQV DMLSSMGVDY FQGFYFAKPM PENEAIEFVL EDMKKSK
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