| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0207 |
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| Symbol | |
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| ID | 6742996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 183458 |
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| End bp | 185776 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642749997 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002120877 |
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| Protein GI | 195952587 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.53871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATGT TAAACTGCAC GTACGAAAAT ACTATAAAAG CCCTTTGGGA AGATTACCTA
AAAACAGATA CGGTAGACCA AGAGCTGCTG AAGAATATAG GAAAAGAAGC TTACGATAAA
ACCCATATAA CTTATATGAA ACATAACTTA GAATATATTA AAAATGATAT CACCAAGAGC
CTAATCAAAA AAGGTCTTCT TACAGAAGAG ACTTACGATA AACTTATATC TTTCTTTGAA
AAGCTAAAAA ACACGATTTC AAGATATTAC TCATTCCGTT GCGTAGAAGA GTCTGACAAA
TTAGAATCGA TGCTTTATAC TGAGGATATA TTACCAGAGC TTCTTAAACC AAGTGCATAC
TTTAAAGATG CTATCACAAA AGACTATATT GAACTTAGCA AAAATCCTTC TATCACTTTT
GATTCTCACG CTTGCCCAGT CTACAAGGAA ATAGAAAACT CAGCAATGCC AGAAGATGTT
AAAAAAGATG TTCATAAAGC ACACGAGAGG CTTCATTATG TGGCTAAGTA TTTTTACAAG
CTTATAGAAC AAGGTGATAT TGACAATCTA TACGGTATAT ACTGGCGTAT GAGATATCTA
AATATCTTAA TAGTAACTGC TATATCAATA TACACTTTGA AATCTGAAAT GGAGTTTTAT
AAAACATTTT TAGAGGGCCA TAGTATACCT ATACTTTTGG TAGATCCAGA TACTTACAGC
ATAGCAAACG CCAATCAAGC TGCTCTTGAT TTTTATGGAT ACACAAAAGA AGAAATAACT
ACTTTGAAAA ATTGGGATAT AAACACGCTT GGCGAAGAAA AGATGAAAGA GCTTGCTCGC
AAAGCAAAAT ATAAAGAGCT AAACTTCTTT AAGCTTAAGC ACAGATTAAA ATCTGGTGAG
ATAAGAGATG TGGAAGTTTA TTCGTCCCCT GTTCATCTAA ATGGCAAAAC TTACTTACTG
TCAATAATAA ACGATATTAC AAAAGAAGAG AGAATAAGAA AAGCTTTTGA GATATTTAAA
GAGATAGAAC ATCTTAGCCT TACATCGGAT AGTGAAGATG GATTTTTTGA AAAGCTTTTA
GATATGTTTG AAAAAGAGGA TATGTTTAAA GATGTATGTA TTTTGAGAAA ACAAAAAAAT
GGTTTTTACA TAAACTCTAC ATCGGAAACA TGCATTGAAG ATGTAAACAA AGAAATAAAC
TTTCCTATCA TCAAAGCTTT TAACACCAAA AGCACCGTAT ACTATGAAAA TTCAAATGAA
ATTGAAGATG ATGCAATAAG ACAAAAACTG ATAGAAAAAG AAACTTTATC TTCCATTGCC
ATGCCTATAT CAGAAAATGG CAACATCTAT GGGTCTATAT GTATATGCTC TAAGGTGAAA
AATTACTTTG AGGATTACAA AGAAATTTTA TCTAACTTGA AAGATAGGAT AGAAAATGCA
CTAAAAACCA TAGAATTAAG GAAAAAACTA AATTATCAAA ACGATCTTGT CAATAGCATT
GTTAAAAACA CACAAGTAGG CGTTTTGGTA TTCGATGAAG ATAATATTTA TTATGAGAAT
GATTATCTTC TTGAACTTTT AGGATACACT CATGAAGATA TAAAAACACT TAGCATCTTT
GATATCTTAT CACCTATACA TGTTAAAGAT ATAATCAAGG CTTTAACCAA TAAAACACCT
ATTATCTTAC AAGAGTTTCA TATTCTTAAC AAGAAAAACC AAACACTTTA TGTAAAGGGC
TCTTTAAACT TCATAAAAGA TGTTGAAAAC AAACCTGTGG CTGTTTTCAC ATTTGTTGAT
ATCACAAAAG AAAAAGAGTT ATCTGATATG TTGTTAAAAC AATCCACTGA AGATCCTCTT
ACAGGTATTT ACAATAGAAG GTATCTTGAA AATAAATTGG AAGAATATGT AAAATTGGCA
AAACGACACG ACAGGCCTTT AAGTCTTATC ATGTTTGACA TAGACTTTTT TAAGCATATA
AACGATTCTT TTGGTCACGA CGTAGGTGAT AAAGTGCTAA AAGCCATAGC AAAAGTGGTA
TCAGAGAACA TAAGAAATAC CGATATCTTT GCAAGATATG GCGGTGAGGA GTTTGTCATC
ATAGCTCCAG AGACCACAAA AGAAGATGCC AAAATATTAG CTGAAAAACT AAGAAGTCTT
ATAAGAAATC TTCATTTTGA AGAAGGGATC AACGTAACTT GCTCTTTTGG CGTGGCATCG
TTAGAAAAGC ACGATACAAA AGAAACGCTT TTAAAACGTG CAGACGAAGC TCTTTACGAA
GCAAAGAAAA CCGGTAGAAA CAAGGTGGTA GTAACATAA
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| Protein sequence | MSMLNCTYEN TIKALWEDYL KTDTVDQELL KNIGKEAYDK THITYMKHNL EYIKNDITKS
LIKKGLLTEE TYDKLISFFE KLKNTISRYY SFRCVEESDK LESMLYTEDI LPELLKPSAY
FKDAITKDYI ELSKNPSITF DSHACPVYKE IENSAMPEDV KKDVHKAHER LHYVAKYFYK
LIEQGDIDNL YGIYWRMRYL NILIVTAISI YTLKSEMEFY KTFLEGHSIP ILLVDPDTYS
IANANQAALD FYGYTKEEIT TLKNWDINTL GEEKMKELAR KAKYKELNFF KLKHRLKSGE
IRDVEVYSSP VHLNGKTYLL SIINDITKEE RIRKAFEIFK EIEHLSLTSD SEDGFFEKLL
DMFEKEDMFK DVCILRKQKN GFYINSTSET CIEDVNKEIN FPIIKAFNTK STVYYENSNE
IEDDAIRQKL IEKETLSSIA MPISENGNIY GSICICSKVK NYFEDYKEIL SNLKDRIENA
LKTIELRKKL NYQNDLVNSI VKNTQVGVLV FDEDNIYYEN DYLLELLGYT HEDIKTLSIF
DILSPIHVKD IIKALTNKTP IILQEFHILN KKNQTLYVKG SLNFIKDVEN KPVAVFTFVD
ITKEKELSDM LLKQSTEDPL TGIYNRRYLE NKLEEYVKLA KRHDRPLSLI MFDIDFFKHI
NDSFGHDVGD KVLKAIAKVV SENIRNTDIF ARYGGEEFVI IAPETTKEDA KILAEKLRSL
IRNLHFEEGI NVTCSFGVAS LEKHDTKETL LKRADEALYE AKKTGRNKVV VT
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