Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0178 |
Symbol | |
ID | 6742967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 159833 |
End bp | 160750 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642749968 |
Product | Mammalian cell entry related domain protein |
Protein accession | YP_002120848 |
Protein GI | 195952558 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAG GAAAACCAAG ATACACGTTG ATAGGATTTT TTATAGTTTT TGGAATAGGT GTTGTAGTAG CCACAATATA TTTTTCTACA AGCTTTTTTA AAAATAGAAA CTTAAACACT TACTACATCT TCACAAAATA CTCAGTAGCT GGTCTATCCA TAGGTTCACC GGTAAAATAC AAAGGTGTTG ATGTTGGGAA AGTAAACGCT ATAAAAATAG CAAAAGACCA AGAAACCATA AAGATAAAAA TATCCGTAGA GAGAAATCTT GACTTAAAAA AAGATGTAAT AGCAAGCTTA GGGATAACTG GTATAACTGG TCTATCATAT ATAGATTTAG AACATGAGAA AGGGGTAAAA GCTTTTTATG ACAAAGATTT GGAGGCCTAC GTGATACCTA TGAAACCATC AGAACTTCAA CAAATATCAA ATTACATACC TCAAATACTT TATTCCGCTT ACAACCTTAT AAAAAATCTA AACAATCTAA CATCCTACAA AAATACCAAA AAATTTGATA CGTTGTTTGA CAACATCAAT GATACCATAA AAAACCTAAA TAGTCTTATA AAAGATTCCA AAAACTCTTT ATCTAATACC AACAAAGTTT TAACGGCTTT TAACAAAAAG ATAAACGAAT TAGATGTAAA AGATATAAAC AATACTGTAG AAAAATATAA CCTCTTGGCG GATAACTTAA ACAAAGAAAC GACAAAATTA GATACCCTTC TTAAAAGCCT AAAAACAAAT TCAGATATGT TGACAAACAA CATATACCCT CAAATAAACA AAACATTGAA AGATATACAA AAAACATCTA AAGAGATGAG GATTCTAATA AAACATATAA AAAATCATCC AAATGCATTT TTTATCATAA ACCGCCAAAA ACCCTTTCCA CTGGAGGAAA CAAAATGA
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Protein sequence | MIEGKPRYTL IGFFIVFGIG VVVATIYFST SFFKNRNLNT YYIFTKYSVA GLSIGSPVKY KGVDVGKVNA IKIAKDQETI KIKISVERNL DLKKDVIASL GITGITGLSY IDLEHEKGVK AFYDKDLEAY VIPMKPSELQ QISNYIPQIL YSAYNLIKNL NNLTSYKNTK KFDTLFDNIN DTIKNLNSLI KDSKNSLSNT NKVLTAFNKK INELDVKDIN NTVEKYNLLA DNLNKETTKL DTLLKSLKTN SDMLTNNIYP QINKTLKDIQ KTSKEMRILI KHIKNHPNAF FIINRQKPFP LEETK
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